Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.65□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm43767-201ENSMUST00000198933 381 ntBASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Carlr-201ENSMUST00000181515 2574 ntBASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms