Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm9987-201ENSMUST00000069768 567 ntBASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Carlr-201ENSMUST00000181515 2574 ntBASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav16d-dv11A0A075B617 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Mir5122-201ENSMUST00000175004 89 ntBASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav16d-dv11A0A075B617 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Rubie-203ENSMUST00000227803 2430 ntBASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm37722-201ENSMUST00000193757 208 ntBASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav16d-dv11A0A075B617 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms