Protein–RNA interactions for Protein: W8DXL4

Lrit3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrit3W8DXL4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lrit3W8DXL4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Lrit3W8DXL4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Lrit3W8DXL4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Lrit3W8DXL4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lrit3W8DXL4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrit3W8DXL4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.85■□□□□ 0.93
Lrit3W8DXL4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Lrit3W8DXL4 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.85■□□□□ 0.93
Lrit3W8DXL4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Lrit3W8DXL4 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.85■□□□□ 0.93
Lrit3W8DXL4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.85■□□□□ 0.93
Lrit3W8DXL4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lrit3W8DXL4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrit3W8DXL4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrit3W8DXL4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrit3W8DXL4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Lrit3W8DXL4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lrit3W8DXL4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrit3W8DXL4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrit3W8DXL4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lrit3W8DXL4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Lrit3W8DXL4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lrit3W8DXL4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Lrit3W8DXL4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.82■□□□□ 0.92
Lrit3W8DXL4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Lrit3W8DXL4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Lrit3W8DXL4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lrit3W8DXL4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lrit3W8DXL4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lrit3W8DXL4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lrit3W8DXL4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.81■□□□□ 0.92
Lrit3W8DXL4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Lrit3W8DXL4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lrit3W8DXL4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lrit3W8DXL4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lrit3W8DXL4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrit3W8DXL4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.8■□□□□ 0.92
Lrit3W8DXL4 Gm45102-201ENSMUST00000207427 857 ntBASIC20.8■□□□□ 0.92
Lrit3W8DXL4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrit3W8DXL4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lrit3W8DXL4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrit3W8DXL4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.79■□□□□ 0.92
Lrit3W8DXL4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrit3W8DXL4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrit3W8DXL4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Lrit3W8DXL4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.78■□□□□ 0.92
Lrit3W8DXL4 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.78■□□□□ 0.92
Lrit3W8DXL4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Lrit3W8DXL4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrit3W8DXL4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrit3W8DXL4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lrit3W8DXL4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lrit3W8DXL4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrit3W8DXL4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.91
Lrit3W8DXL4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lrit3W8DXL4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
Lrit3W8DXL4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrit3W8DXL4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.76■□□□□ 0.91
Lrit3W8DXL4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrit3W8DXL4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.75■□□□□ 0.91
Lrit3W8DXL4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrit3W8DXL4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lrit3W8DXL4 Gm9812-201ENSMUST00000061934 968 ntBASIC20.75■□□□□ 0.91
Lrit3W8DXL4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lrit3W8DXL4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.75■□□□□ 0.91
Lrit3W8DXL4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrit3W8DXL4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrit3W8DXL4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lrit3W8DXL4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.74■□□□□ 0.91
Lrit3W8DXL4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.74■□□□□ 0.91
Lrit3W8DXL4 Gm15820-201ENSMUST00000201566 728 ntBASIC20.74■□□□□ 0.91
Lrit3W8DXL4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrit3W8DXL4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lrit3W8DXL4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Lrit3W8DXL4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lrit3W8DXL4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lrit3W8DXL4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrit3W8DXL4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.73■□□□□ 0.91
Lrit3W8DXL4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.73■□□□□ 0.91
Lrit3W8DXL4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrit3W8DXL4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrit3W8DXL4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrit3W8DXL4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrit3W8DXL4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrit3W8DXL4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrit3W8DXL4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrit3W8DXL4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrit3W8DXL4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrit3W8DXL4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrit3W8DXL4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrit3W8DXL4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.71■□□□□ 0.91
Lrit3W8DXL4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lrit3W8DXL4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.71■□□□□ 0.91
Lrit3W8DXL4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.71■□□□□ 0.91
Lrit3W8DXL4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrit3W8DXL4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrit3W8DXL4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Lrit3W8DXL4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lrit3W8DXL4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms