Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.73■□□□□ 0.91
Zc3h8Q9JJ48 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3h8Q9JJ48 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3h8Q9JJ48 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3h8Q9JJ48 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3h8Q9JJ48 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3h8Q9JJ48 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3h8Q9JJ48 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.72■□□□□ 0.91
Zc3h8Q9JJ48 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3h8Q9JJ48 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.71■□□□□ 0.91
Zc3h8Q9JJ48 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Zc3h8Q9JJ48 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.71■□□□□ 0.91
Zc3h8Q9JJ48 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Zc3h8Q9JJ48 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Zc3h8Q9JJ48 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Zc3h8Q9JJ48 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Zc3h8Q9JJ48 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Zc3h8Q9JJ48 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Zc3h8Q9JJ48 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zc3h8Q9JJ48 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Zc3h8Q9JJ48 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zc3h8Q9JJ48 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zc3h8Q9JJ48 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3h8Q9JJ48 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3h8Q9JJ48 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3h8Q9JJ48 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3h8Q9JJ48 Gm10420-201ENSMUST00000121713 882 ntBASIC20.69■□□□□ 0.9
Zc3h8Q9JJ48 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.69■□□□□ 0.9
Zc3h8Q9JJ48 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3h8Q9JJ48 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3h8Q9JJ48 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.69■□□□□ 0.9
Zc3h8Q9JJ48 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3h8Q9JJ48 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zc3h8Q9JJ48 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zc3h8Q9JJ48 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zc3h8Q9JJ48 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zc3h8Q9JJ48 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zc3h8Q9JJ48 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zc3h8Q9JJ48 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.67■□□□□ 0.9
Zc3h8Q9JJ48 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Zc3h8Q9JJ48 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zc3h8Q9JJ48 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Zc3h8Q9JJ48 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.66■□□□□ 0.9
Zc3h8Q9JJ48 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zc3h8Q9JJ48 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zc3h8Q9JJ48 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zc3h8Q9JJ48 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zc3h8Q9JJ48 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zc3h8Q9JJ48 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zc3h8Q9JJ48 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zc3h8Q9JJ48 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Zc3h8Q9JJ48 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.65■□□□□ 0.9
Zc3h8Q9JJ48 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zc3h8Q9JJ48 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Zc3h8Q9JJ48 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Zc3h8Q9JJ48 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zc3h8Q9JJ48 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zc3h8Q9JJ48 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.64■□□□□ 0.89
Zc3h8Q9JJ48 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Zc3h8Q9JJ48 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zc3h8Q9JJ48 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zc3h8Q9JJ48 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3h8Q9JJ48 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3h8Q9JJ48 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3h8Q9JJ48 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h8Q9JJ48 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Zc3h8Q9JJ48 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h8Q9JJ48 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.61■□□□□ 0.89
Zc3h8Q9JJ48 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h8Q9JJ48 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h8Q9JJ48 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.59■□□□□ 0.89
Zc3h8Q9JJ48 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h8Q9JJ48 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h8Q9JJ48 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h8Q9JJ48 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h8Q9JJ48 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3h8Q9JJ48 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zc3h8Q9JJ48 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h8Q9JJ48 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.57■□□□□ 0.88
Zc3h8Q9JJ48 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h8Q9JJ48 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h8Q9JJ48 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h8Q9JJ48 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h8Q9JJ48 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Zc3h8Q9JJ48 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h8Q9JJ48 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h8Q9JJ48 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h8Q9JJ48 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.56■□□□□ 0.88
Zc3h8Q9JJ48 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h8Q9JJ48 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Zc3h8Q9JJ48 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Zc3h8Q9JJ48 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h8Q9JJ48 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h8Q9JJ48 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h8Q9JJ48 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zc3h8Q9JJ48 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Zc3h8Q9JJ48 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Zc3h8Q9JJ48 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zc3h8Q9JJ48 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zc3h8Q9JJ48 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms