Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vps35Q9EQH3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vps35Q9EQH3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vps35Q9EQH3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
Vps35Q9EQH3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Vps35Q9EQH3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
Vps35Q9EQH3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Vps35Q9EQH3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Vps35Q9EQH3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vps35Q9EQH3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vps35Q9EQH3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vps35Q9EQH3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vps35Q9EQH3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
Vps35Q9EQH3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vps35Q9EQH3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vps35Q9EQH3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vps35Q9EQH3 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.17■■□□□ 1.14
Vps35Q9EQH3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.17■■□□□ 1.14
Vps35Q9EQH3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Vps35Q9EQH3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Vps35Q9EQH3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Vps35Q9EQH3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vps35Q9EQH3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Vps35Q9EQH3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Vps35Q9EQH3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vps35Q9EQH3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Vps35Q9EQH3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vps35Q9EQH3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vps35Q9EQH3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vps35Q9EQH3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vps35Q9EQH3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vps35Q9EQH3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.15■■□□□ 1.14
Vps35Q9EQH3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.14■■□□□ 1.14
Vps35Q9EQH3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Vps35Q9EQH3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vps35Q9EQH3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vps35Q9EQH3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.13■■□□□ 1.13
Vps35Q9EQH3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vps35Q9EQH3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vps35Q9EQH3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.12■■□□□ 1.13
Vps35Q9EQH3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vps35Q9EQH3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.12■■□□□ 1.13
Vps35Q9EQH3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.11■■□□□ 1.13
Vps35Q9EQH3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vps35Q9EQH3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Vps35Q9EQH3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vps35Q9EQH3 Gm44428-201ENSMUST00000204474 874 ntBASIC22.11■■□□□ 1.13
Vps35Q9EQH3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vps35Q9EQH3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vps35Q9EQH3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.1■■□□□ 1.13
Vps35Q9EQH3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vps35Q9EQH3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vps35Q9EQH3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Vps35Q9EQH3 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.09■■□□□ 1.13
Vps35Q9EQH3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vps35Q9EQH3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vps35Q9EQH3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Vps35Q9EQH3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vps35Q9EQH3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vps35Q9EQH3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.07■■□□□ 1.12
Vps35Q9EQH3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.07■■□□□ 1.12
Vps35Q9EQH3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.07■■□□□ 1.12
Vps35Q9EQH3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.06■■□□□ 1.12
Vps35Q9EQH3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vps35Q9EQH3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vps35Q9EQH3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vps35Q9EQH3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Vps35Q9EQH3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vps35Q9EQH3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vps35Q9EQH3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vps35Q9EQH3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vps35Q9EQH3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Vps35Q9EQH3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Vps35Q9EQH3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.05■■□□□ 1.12
Vps35Q9EQH3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.05■■□□□ 1.12
Vps35Q9EQH3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.04■■□□□ 1.12
Vps35Q9EQH3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.04■■□□□ 1.12
Vps35Q9EQH3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.04■■□□□ 1.12
Vps35Q9EQH3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.04■■□□□ 1.12
Vps35Q9EQH3 Gm27502-201ENSMUST00000183495 199 ntBASIC22.04■■□□□ 1.12
Vps35Q9EQH3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Vps35Q9EQH3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vps35Q9EQH3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vps35Q9EQH3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.04■■□□□ 1.12
Vps35Q9EQH3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Gm12366-201ENSMUST00000121722 873 ntBASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Gm5786-201ENSMUST00000085368 882 ntBASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms