Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cthrc1Q9D1D6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cthrc1Q9D1D6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cthrc1Q9D1D6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cthrc1Q9D1D6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cthrc1Q9D1D6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cthrc1Q9D1D6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cthrc1Q9D1D6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cthrc1Q9D1D6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cthrc1Q9D1D6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cthrc1Q9D1D6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cthrc1Q9D1D6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cthrc1Q9D1D6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.79■□□□□ 0.92
Cthrc1Q9D1D6 Gm12366-201ENSMUST00000121722 873 ntBASIC20.79■□□□□ 0.92
Cthrc1Q9D1D6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.79■□□□□ 0.92
Cthrc1Q9D1D6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cthrc1Q9D1D6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.79■□□□□ 0.92
Cthrc1Q9D1D6 Gm5786-201ENSMUST00000085368 882 ntBASIC20.79■□□□□ 0.92
Cthrc1Q9D1D6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cthrc1Q9D1D6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.78■□□□□ 0.92
Cthrc1Q9D1D6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cthrc1Q9D1D6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.78■□□□□ 0.92
Cthrc1Q9D1D6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cthrc1Q9D1D6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cthrc1Q9D1D6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Cthrc1Q9D1D6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cthrc1Q9D1D6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cthrc1Q9D1D6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cthrc1Q9D1D6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cthrc1Q9D1D6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.77■□□□□ 0.92
Cthrc1Q9D1D6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cthrc1Q9D1D6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cthrc1Q9D1D6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cthrc1Q9D1D6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cthrc1Q9D1D6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.76■□□□□ 0.91
Cthrc1Q9D1D6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cthrc1Q9D1D6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cthrc1Q9D1D6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.76■□□□□ 0.91
Cthrc1Q9D1D6 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.76■□□□□ 0.91
Cthrc1Q9D1D6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.75■□□□□ 0.91
Cthrc1Q9D1D6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cthrc1Q9D1D6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cthrc1Q9D1D6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cthrc1Q9D1D6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cthrc1Q9D1D6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cthrc1Q9D1D6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cthrc1Q9D1D6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.75■□□□□ 0.91
Cthrc1Q9D1D6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cthrc1Q9D1D6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cthrc1Q9D1D6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cthrc1Q9D1D6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cthrc1Q9D1D6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cthrc1Q9D1D6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cthrc1Q9D1D6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cthrc1Q9D1D6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cthrc1Q9D1D6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cthrc1Q9D1D6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cthrc1Q9D1D6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cthrc1Q9D1D6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cthrc1Q9D1D6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cthrc1Q9D1D6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Cthrc1Q9D1D6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cthrc1Q9D1D6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cthrc1Q9D1D6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cthrc1Q9D1D6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cthrc1Q9D1D6 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.71■□□□□ 0.91
Cthrc1Q9D1D6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.71■□□□□ 0.91
Cthrc1Q9D1D6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.7■□□□□ 0.9
Cthrc1Q9D1D6 Gm27502-201ENSMUST00000183495 199 ntBASIC20.7■□□□□ 0.9
Cthrc1Q9D1D6 Gm44428-201ENSMUST00000204474 874 ntBASIC20.7■□□□□ 0.9
Cthrc1Q9D1D6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cthrc1Q9D1D6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.69■□□□□ 0.9
Cthrc1Q9D1D6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cthrc1Q9D1D6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cthrc1Q9D1D6 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.68■□□□□ 0.9
Cthrc1Q9D1D6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cthrc1Q9D1D6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cthrc1Q9D1D6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cthrc1Q9D1D6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cthrc1Q9D1D6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.67■□□□□ 0.9
Cthrc1Q9D1D6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cthrc1Q9D1D6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.67■□□□□ 0.9
Cthrc1Q9D1D6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cthrc1Q9D1D6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cthrc1Q9D1D6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.66■□□□□ 0.9
Cthrc1Q9D1D6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cthrc1Q9D1D6 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.66■□□□□ 0.9
Cthrc1Q9D1D6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cthrc1Q9D1D6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cthrc1Q9D1D6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cthrc1Q9D1D6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.65■□□□□ 0.9
Cthrc1Q9D1D6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cthrc1Q9D1D6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cthrc1Q9D1D6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cthrc1Q9D1D6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cthrc1Q9D1D6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cthrc1Q9D1D6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cthrc1Q9D1D6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cthrc1Q9D1D6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cthrc1Q9D1D6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms