Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mrpl55Q9CZ83 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.51□□□□□ -0.09
Mrpl55Q9CZ83 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.51□□□□□ -0.09
Mrpl55Q9CZ83 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mrpl55Q9CZ83 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mrpl55Q9CZ83 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mrpl55Q9CZ83 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC14.51□□□□□ -0.09
Mrpl55Q9CZ83 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mrpl55Q9CZ83 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mrpl55Q9CZ83 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mrpl55Q9CZ83 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mrpl55Q9CZ83 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mrpl55Q9CZ83 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mrpl55Q9CZ83 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mrpl55Q9CZ83 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
Mrpl55Q9CZ83 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Mrpl55Q9CZ83 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Mrpl55Q9CZ83 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mrpl55Q9CZ83 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mrpl55Q9CZ83 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mrpl55Q9CZ83 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mrpl55Q9CZ83 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mrpl55Q9CZ83 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.49□□□□□ -0.09
Mrpl55Q9CZ83 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mrpl55Q9CZ83 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mrpl55Q9CZ83 Gm30023-201ENSMUST00000197970 889 ntBASIC14.49□□□□□ -0.09
Mrpl55Q9CZ83 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.49□□□□□ -0.09
Mrpl55Q9CZ83 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mrpl55Q9CZ83 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mrpl55Q9CZ83 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mrpl55Q9CZ83 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Mrpl55Q9CZ83 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Mrpl55Q9CZ83 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC14.48□□□□□ -0.09
Mrpl55Q9CZ83 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Mrpl55Q9CZ83 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.48□□□□□ -0.09
Mrpl55Q9CZ83 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mrpl55Q9CZ83 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Mrpl55Q9CZ83 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Mrpl55Q9CZ83 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mrpl55Q9CZ83 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mrpl55Q9CZ83 Particl-201ENSMUST00000205370 1560 ntBASIC14.47□□□□□ -0.09
Mrpl55Q9CZ83 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mrpl55Q9CZ83 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mrpl55Q9CZ83 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mrpl55Q9CZ83 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mrpl55Q9CZ83 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Mrpl55Q9CZ83 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Mrpl55Q9CZ83 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC14.46□□□□□ -0.09
Mrpl55Q9CZ83 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Mrpl55Q9CZ83 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Mrpl55Q9CZ83 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Mrpl55Q9CZ83 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Mrpl55Q9CZ83 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Mrpl55Q9CZ83 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mrpl55Q9CZ83 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mrpl55Q9CZ83 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mrpl55Q9CZ83 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Mrpl55Q9CZ83 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Mrpl55Q9CZ83 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Mrpl55Q9CZ83 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Mrpl55Q9CZ83 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Mrpl55Q9CZ83 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.45□□□□□ -0.1
Mrpl55Q9CZ83 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mrpl55Q9CZ83 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mrpl55Q9CZ83 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mrpl55Q9CZ83 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Mrpl55Q9CZ83 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC14.44□□□□□ -0.1
Mrpl55Q9CZ83 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mrpl55Q9CZ83 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.44□□□□□ -0.1
Mrpl55Q9CZ83 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mrpl55Q9CZ83 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mrpl55Q9CZ83 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mrpl55Q9CZ83 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mrpl55Q9CZ83 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Mrpl55Q9CZ83 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.43□□□□□ -0.1
Mrpl55Q9CZ83 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Mrpl55Q9CZ83 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC14.43□□□□□ -0.1
Mrpl55Q9CZ83 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.43□□□□□ -0.1
Mrpl55Q9CZ83 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl55Q9CZ83 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl55Q9CZ83 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl55Q9CZ83 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl55Q9CZ83 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl55Q9CZ83 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl55Q9CZ83 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl55Q9CZ83 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Mrpl55Q9CZ83 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl55Q9CZ83 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.41□□□□□ -0.1
Mrpl55Q9CZ83 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl55Q9CZ83 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl55Q9CZ83 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl55Q9CZ83 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl55Q9CZ83 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Mrpl55Q9CZ83 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Mrpl55Q9CZ83 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.4□□□□□ -0.1
Mrpl55Q9CZ83 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.4□□□□□ -0.1
Mrpl55Q9CZ83 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl55Q9CZ83 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC14.39□□□□□ -0.11
Mrpl55Q9CZ83 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl55Q9CZ83 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms