Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Krt88Q9CPR6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Krt88Q9CPR6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Krt88Q9CPR6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Krt88Q9CPR6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Krt88Q9CPR6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Krt88Q9CPR6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Krt88Q9CPR6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Krt88Q9CPR6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Krt88Q9CPR6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Krt88Q9CPR6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Krt88Q9CPR6 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.08■□□□□ 0.81
Krt88Q9CPR6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.08■□□□□ 0.8
Krt88Q9CPR6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Krt88Q9CPR6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt88Q9CPR6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt88Q9CPR6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Krt88Q9CPR6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt88Q9CPR6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt88Q9CPR6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt88Q9CPR6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt88Q9CPR6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt88Q9CPR6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt88Q9CPR6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt88Q9CPR6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Krt88Q9CPR6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Krt88Q9CPR6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt88Q9CPR6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Krt88Q9CPR6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Krt88Q9CPR6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Krt88Q9CPR6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt88Q9CPR6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt88Q9CPR6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Krt88Q9CPR6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt88Q9CPR6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.02■□□□□ 0.8
Krt88Q9CPR6 Gm45855-201ENSMUST00000212546 880 ntBASIC20.02■□□□□ 0.8
Krt88Q9CPR6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt88Q9CPR6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Krt88Q9CPR6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Krt88Q9CPR6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.01■□□□□ 0.79
Krt88Q9CPR6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt88Q9CPR6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Krt88Q9CPR6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Krt88Q9CPR6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20■□□□□ 0.79
Krt88Q9CPR6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.99■□□□□ 0.79
Krt88Q9CPR6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Krt88Q9CPR6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Krt88Q9CPR6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Krt88Q9CPR6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Krt88Q9CPR6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Krt88Q9CPR6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt88Q9CPR6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt88Q9CPR6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Krt88Q9CPR6 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt88Q9CPR6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
Krt88Q9CPR6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt88Q9CPR6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt88Q9CPR6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.96■□□□□ 0.79
Krt88Q9CPR6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Krt88Q9CPR6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.95■□□□□ 0.78
Krt88Q9CPR6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Krt88Q9CPR6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt88Q9CPR6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt88Q9CPR6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.95■□□□□ 0.78
Krt88Q9CPR6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt88Q9CPR6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt88Q9CPR6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt88Q9CPR6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.94■□□□□ 0.78
Krt88Q9CPR6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt88Q9CPR6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Krt88Q9CPR6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt88Q9CPR6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Krt88Q9CPR6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt88Q9CPR6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Krt88Q9CPR6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Krt88Q9CPR6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt88Q9CPR6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt88Q9CPR6 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.92■□□□□ 0.78
Krt88Q9CPR6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt88Q9CPR6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt88Q9CPR6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt88Q9CPR6 Gm37136-201ENSMUST00000194368 194 ntBASIC19.92■□□□□ 0.78
Krt88Q9CPR6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.92■□□□□ 0.78
Krt88Q9CPR6 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.92■□□□□ 0.78
Krt88Q9CPR6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
Krt88Q9CPR6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt88Q9CPR6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms