Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubqln4Q99NB8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubqln4Q99NB8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubqln4Q99NB8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubqln4Q99NB8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubqln4Q99NB8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubqln4Q99NB8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubqln4Q99NB8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubqln4Q99NB8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubqln4Q99NB8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Ubqln4Q99NB8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubqln4Q99NB8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubqln4Q99NB8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.21■□□□□ 0.83
Ubqln4Q99NB8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.21■□□□□ 0.83
Ubqln4Q99NB8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.21■□□□□ 0.83
Ubqln4Q99NB8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubqln4Q99NB8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubqln4Q99NB8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ubqln4Q99NB8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubqln4Q99NB8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ubqln4Q99NB8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ubqln4Q99NB8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.19■□□□□ 0.82
Ubqln4Q99NB8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubqln4Q99NB8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubqln4Q99NB8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubqln4Q99NB8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubqln4Q99NB8 Scarna2-201ENSMUST00000157560 414 ntBASIC20.18■□□□□ 0.82
Ubqln4Q99NB8 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.18■□□□□ 0.82
Ubqln4Q99NB8 Gm9806-201ENSMUST00000051080 552 ntBASIC20.18■□□□□ 0.82
Ubqln4Q99NB8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubqln4Q99NB8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubqln4Q99NB8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubqln4Q99NB8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubqln4Q99NB8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubqln4Q99NB8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubqln4Q99NB8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ubqln4Q99NB8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubqln4Q99NB8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.17■□□□□ 0.82
Ubqln4Q99NB8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ubqln4Q99NB8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubqln4Q99NB8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.17■□□□□ 0.82
Ubqln4Q99NB8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ubqln4Q99NB8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubqln4Q99NB8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubqln4Q99NB8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubqln4Q99NB8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubqln4Q99NB8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.16■□□□□ 0.82
Ubqln4Q99NB8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ubqln4Q99NB8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubqln4Q99NB8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubqln4Q99NB8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.15■□□□□ 0.82
Ubqln4Q99NB8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ubqln4Q99NB8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubqln4Q99NB8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ubqln4Q99NB8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubqln4Q99NB8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ubqln4Q99NB8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ubqln4Q99NB8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubqln4Q99NB8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ubqln4Q99NB8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubqln4Q99NB8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ubqln4Q99NB8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ubqln4Q99NB8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.14■□□□□ 0.81
Ubqln4Q99NB8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubqln4Q99NB8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubqln4Q99NB8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubqln4Q99NB8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.13■□□□□ 0.81
Ubqln4Q99NB8 Gm16437-201ENSMUST00000025669 507 ntBASIC20.13■□□□□ 0.81
Ubqln4Q99NB8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ubqln4Q99NB8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
Ubqln4Q99NB8 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.12■□□□□ 0.81
Ubqln4Q99NB8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubqln4Q99NB8 Gm11687-201ENSMUST00000118911 886 ntBASIC20.12■□□□□ 0.81
Ubqln4Q99NB8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubqln4Q99NB8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubqln4Q99NB8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubqln4Q99NB8 Gm44428-201ENSMUST00000204474 874 ntBASIC20.1■□□□□ 0.81
Ubqln4Q99NB8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubqln4Q99NB8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ubqln4Q99NB8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubqln4Q99NB8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubqln4Q99NB8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubqln4Q99NB8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubqln4Q99NB8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubqln4Q99NB8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubqln4Q99NB8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubqln4Q99NB8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubqln4Q99NB8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.08■□□□□ 0.8
Ubqln4Q99NB8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubqln4Q99NB8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.07■□□□□ 0.8
Ubqln4Q99NB8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubqln4Q99NB8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ubqln4Q99NB8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.06■□□□□ 0.8
Ubqln4Q99NB8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Ubqln4Q99NB8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Ubqln4Q99NB8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ubqln4Q99NB8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.05■□□□□ 0.8
Ubqln4Q99NB8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ubqln4Q99NB8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ubqln4Q99NB8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms