Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.87■□□□□ 0.77
Thumpd1Q99J36 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Thumpd1Q99J36 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Thumpd1Q99J36 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Thumpd1Q99J36 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Thumpd1Q99J36 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Thumpd1Q99J36 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Thumpd1Q99J36 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Thumpd1Q99J36 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Thumpd1Q99J36 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.84■□□□□ 0.77
Thumpd1Q99J36 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Thumpd1Q99J36 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Thumpd1Q99J36 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Thumpd1Q99J36 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Thumpd1Q99J36 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Thumpd1Q99J36 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Thumpd1Q99J36 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Thumpd1Q99J36 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Thumpd1Q99J36 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Thumpd1Q99J36 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Thumpd1Q99J36 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Thumpd1Q99J36 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Thumpd1Q99J36 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Thumpd1Q99J36 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Thumpd1Q99J36 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Thumpd1Q99J36 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.82■□□□□ 0.76
Thumpd1Q99J36 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thumpd1Q99J36 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Thumpd1Q99J36 Nkain2-201ENSMUST00000092602 558 ntBASIC19.8■□□□□ 0.76
Thumpd1Q99J36 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thumpd1Q99J36 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thumpd1Q99J36 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.78■□□□□ 0.76
Thumpd1Q99J36 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd1Q99J36 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.77■□□□□ 0.76
Thumpd1Q99J36 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Thumpd1Q99J36 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.77■□□□□ 0.75
Thumpd1Q99J36 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Thumpd1Q99J36 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.75■□□□□ 0.75
Thumpd1Q99J36 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd1Q99J36 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Thumpd1Q99J36 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd1Q99J36 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd1Q99J36 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.74■□□□□ 0.75
Thumpd1Q99J36 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Thumpd1Q99J36 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd1Q99J36 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd1Q99J36 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd1Q99J36 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd1Q99J36 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Thumpd1Q99J36 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Thumpd1Q99J36 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.73■□□□□ 0.75
Thumpd1Q99J36 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd1Q99J36 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd1Q99J36 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Thumpd1Q99J36 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.7■□□□□ 0.74
Thumpd1Q99J36 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Thumpd1Q99J36 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Thumpd1Q99J36 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Thumpd1Q99J36 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd1Q99J36 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd1Q99J36 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms