Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cacna1dQ99246 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.31■■□□□ 1.16
Cacna1dQ99246 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cacna1dQ99246 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Cacna1dQ99246 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cacna1dQ99246 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cacna1dQ99246 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.3■■□□□ 1.16
Cacna1dQ99246 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cacna1dQ99246 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cacna1dQ99246 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.29■■□□□ 1.16
Cacna1dQ99246 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cacna1dQ99246 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cacna1dQ99246 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cacna1dQ99246 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cacna1dQ99246 Gm22567-201ENSMUST00000175542 342 ntBASIC22.28■■□□□ 1.16
Cacna1dQ99246 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Cacna1dQ99246 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Cacna1dQ99246 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacna1dQ99246 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacna1dQ99246 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacna1dQ99246 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cacna1dQ99246 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.26■■□□□ 1.15
Cacna1dQ99246 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Cacna1dQ99246 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cacna1dQ99246 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cacna1dQ99246 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cacna1dQ99246 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cacna1dQ99246 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cacna1dQ99246 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cacna1dQ99246 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacna1dQ99246 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacna1dQ99246 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacna1dQ99246 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cacna1dQ99246 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cacna1dQ99246 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cacna1dQ99246 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Cacna1dQ99246 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cacna1dQ99246 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cacna1dQ99246 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.22■■□□□ 1.15
Cacna1dQ99246 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.22■■□□□ 1.15
Cacna1dQ99246 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.22■■□□□ 1.15
Cacna1dQ99246 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.22■■□□□ 1.15
Cacna1dQ99246 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.22■■□□□ 1.15
Cacna1dQ99246 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cacna1dQ99246 Gm45444-201ENSMUST00000211394 898 ntBASIC22.22■■□□□ 1.15
Cacna1dQ99246 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cacna1dQ99246 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cacna1dQ99246 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cacna1dQ99246 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.21■■□□□ 1.15
Cacna1dQ99246 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.21■■□□□ 1.15
Cacna1dQ99246 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cacna1dQ99246 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
Cacna1dQ99246 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cacna1dQ99246 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.2■■□□□ 1.14
Cacna1dQ99246 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Cacna1dQ99246 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.19■■□□□ 1.14
Cacna1dQ99246 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.19■■□□□ 1.14
Cacna1dQ99246 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cacna1dQ99246 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.19■■□□□ 1.14
Cacna1dQ99246 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.19■■□□□ 1.14
Cacna1dQ99246 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Cacna1dQ99246 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cacna1dQ99246 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cacna1dQ99246 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cacna1dQ99246 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Cacna1dQ99246 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cacna1dQ99246 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.18■■□□□ 1.14
Cacna1dQ99246 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cacna1dQ99246 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cacna1dQ99246 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.17■■□□□ 1.14
Cacna1dQ99246 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cacna1dQ99246 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.17■■□□□ 1.14
Cacna1dQ99246 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.16■■□□□ 1.14
Cacna1dQ99246 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.16■■□□□ 1.14
Cacna1dQ99246 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Cacna1dQ99246 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.16■■□□□ 1.14
Cacna1dQ99246 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.16■■□□□ 1.14
Cacna1dQ99246 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.16■■□□□ 1.14
Cacna1dQ99246 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacna1dQ99246 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cacna1dQ99246 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.15■■□□□ 1.14
Cacna1dQ99246 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cacna1dQ99246 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cacna1dQ99246 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cacna1dQ99246 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cacna1dQ99246 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Cacna1dQ99246 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cacna1dQ99246 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cacna1dQ99246 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cacna1dQ99246 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Cacna1dQ99246 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cacna1dQ99246 Gm15039-201ENSMUST00000118914 875 ntBASIC22.13■■□□□ 1.13
Cacna1dQ99246 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cacna1dQ99246 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.13■■□□□ 1.13
Cacna1dQ99246 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cacna1dQ99246 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.12■■□□□ 1.13
Cacna1dQ99246 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Cacna1dQ99246 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cacna1dQ99246 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cacna1dQ99246 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms