Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b5Q923D4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b5Q923D4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b5Q923D4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b5Q923D4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b5Q923D4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b5Q923D4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.71■□□□□ 0.75
Sf3b5Q923D4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b5Q923D4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Sf3b5Q923D4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b5Q923D4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b5Q923D4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.7■□□□□ 0.74
Sf3b5Q923D4 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.7■□□□□ 0.74
Sf3b5Q923D4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b5Q923D4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b5Q923D4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b5Q923D4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sf3b5Q923D4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b5Q923D4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b5Q923D4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.68■□□□□ 0.74
Sf3b5Q923D4 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.68■□□□□ 0.74
Sf3b5Q923D4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b5Q923D4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Sf3b5Q923D4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b5Q923D4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b5Q923D4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b5Q923D4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b5Q923D4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sf3b5Q923D4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sf3b5Q923D4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b5Q923D4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b5Q923D4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b5Q923D4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b5Q923D4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b5Q923D4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.66■□□□□ 0.74
Sf3b5Q923D4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b5Q923D4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b5Q923D4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b5Q923D4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.65■□□□□ 0.74
Sf3b5Q923D4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b5Q923D4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sf3b5Q923D4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sf3b5Q923D4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Sf3b5Q923D4 Gm14523-201ENSMUST00000117260 558 ntBASIC19.64■□□□□ 0.73
Sf3b5Q923D4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b5Q923D4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sf3b5Q923D4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b5Q923D4 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.64■□□□□ 0.73
Sf3b5Q923D4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b5Q923D4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Sf3b5Q923D4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b5Q923D4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b5Q923D4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.63■□□□□ 0.73
Sf3b5Q923D4 Gm27502-201ENSMUST00000183495 199 ntBASIC19.63■□□□□ 0.73
Sf3b5Q923D4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b5Q923D4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b5Q923D4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b5Q923D4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b5Q923D4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b5Q923D4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.62■□□□□ 0.73
Sf3b5Q923D4 Gm12366-201ENSMUST00000121722 873 ntBASIC19.62■□□□□ 0.73
Sf3b5Q923D4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.62■□□□□ 0.73
Sf3b5Q923D4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.62■□□□□ 0.73
Sf3b5Q923D4 Gm5786-201ENSMUST00000085368 882 ntBASIC19.62■□□□□ 0.73
Sf3b5Q923D4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b5Q923D4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b5Q923D4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b5Q923D4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b5Q923D4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Sf3b5Q923D4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b5Q923D4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b5Q923D4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b5Q923D4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.61■□□□□ 0.73
Sf3b5Q923D4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.61■□□□□ 0.73
Sf3b5Q923D4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.61■□□□□ 0.73
Sf3b5Q923D4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Sf3b5Q923D4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b5Q923D4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Sf3b5Q923D4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b5Q923D4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sf3b5Q923D4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b5Q923D4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b5Q923D4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b5Q923D4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b5Q923D4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b5Q923D4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b5Q923D4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b5Q923D4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.59■□□□□ 0.73
Sf3b5Q923D4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b5Q923D4 Gm7332-201ENSMUST00000118351 454 ntBASIC19.59■□□□□ 0.73
Sf3b5Q923D4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sf3b5Q923D4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b5Q923D4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b5Q923D4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Sf3b5Q923D4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sf3b5Q923D4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3b5Q923D4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3b5Q923D4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3b5Q923D4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3b5Q923D4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms