Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Pcdhb1Q91Y08 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb1Q91Y08 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb1Q91Y08 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.22■■□□□ 1.31
Pcdhb1Q91Y08 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb1Q91Y08 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
Pcdhb1Q91Y08 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.21■■□□□ 1.31
Pcdhb1Q91Y08 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb1Q91Y08 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb1Q91Y08 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb1Q91Y08 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb1Q91Y08 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb1Q91Y08 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb1Q91Y08 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Pcdhb1Q91Y08 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb1Q91Y08 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb1Q91Y08 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb1Q91Y08 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.2■■□□□ 1.3
Pcdhb1Q91Y08 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb1Q91Y08 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb1Q91Y08 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb1Q91Y08 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb1Q91Y08 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Pcdhb1Q91Y08 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb1Q91Y08 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb1Q91Y08 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb1Q91Y08 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb1Q91Y08 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb1Q91Y08 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Pcdhb1Q91Y08 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb1Q91Y08 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb1Q91Y08 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.16■■□□□ 1.3
Pcdhb1Q91Y08 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.16■■□□□ 1.3
Pcdhb1Q91Y08 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb1Q91Y08 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.16■■□□□ 1.3
Pcdhb1Q91Y08 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.16■■□□□ 1.3
Pcdhb1Q91Y08 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.15■■□□□ 1.3
Pcdhb1Q91Y08 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb1Q91Y08 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Pcdhb1Q91Y08 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb1Q91Y08 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb1Q91Y08 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb1Q91Y08 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.15■■□□□ 1.3
Pcdhb1Q91Y08 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb1Q91Y08 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb1Q91Y08 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb1Q91Y08 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
Pcdhb1Q91Y08 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb1Q91Y08 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb1Q91Y08 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb1Q91Y08 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb1Q91Y08 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.14■■□□□ 1.29
Pcdhb1Q91Y08 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.13■■□□□ 1.29
Pcdhb1Q91Y08 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Pcdhb1Q91Y08 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Pcdhb1Q91Y08 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb1Q91Y08 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Pcdhb1Q91Y08 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb1Q91Y08 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb1Q91Y08 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb1Q91Y08 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb1Q91Y08 Scarna2-201ENSMUST00000157560 414 ntBASIC23.12■■□□□ 1.29
Pcdhb1Q91Y08 Gm9806-201ENSMUST00000051080 552 ntBASIC23.12■■□□□ 1.29
Pcdhb1Q91Y08 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb1Q91Y08 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb1Q91Y08 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb1Q91Y08 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb1Q91Y08 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Pcdhb1Q91Y08 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb1Q91Y08 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.1■■□□□ 1.29
Pcdhb1Q91Y08 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb1Q91Y08 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.09■■□□□ 1.29
Pcdhb1Q91Y08 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb1Q91Y08 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb1Q91Y08 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb1Q91Y08 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb1Q91Y08 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhb1Q91Y08 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhb1Q91Y08 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb1Q91Y08 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb1Q91Y08 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb1Q91Y08 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb1Q91Y08 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Pcdhb1Q91Y08 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb1Q91Y08 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb1Q91Y08 Gm16437-201ENSMUST00000025669 507 ntBASIC23.07■■□□□ 1.28
Pcdhb1Q91Y08 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb1Q91Y08 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb1Q91Y08 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb1Q91Y08 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
Pcdhb1Q91Y08 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.06■■□□□ 1.28
Pcdhb1Q91Y08 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Pcdhb1Q91Y08 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb1Q91Y08 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.06■■□□□ 1.28
Pcdhb1Q91Y08 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.05■■□□□ 1.28
Pcdhb1Q91Y08 Gm44428-201ENSMUST00000204474 874 ntBASIC23.05■■□□□ 1.28
Pcdhb1Q91Y08 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb1Q91Y08 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb1Q91Y08 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb1Q91Y08 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms