Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdhb5Q91XZ5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdhb5Q91XZ5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
Pcdhb5Q91XZ5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.62■■□□□ 1.85
Pcdhb5Q91XZ5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdhb5Q91XZ5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdhb5Q91XZ5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdhb5Q91XZ5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdhb5Q91XZ5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb5Q91XZ5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.61■■□□□ 1.85
Pcdhb5Q91XZ5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb5Q91XZ5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdhb5Q91XZ5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdhb5Q91XZ5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.6■■□□□ 1.85
Pcdhb5Q91XZ5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb5Q91XZ5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb5Q91XZ5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb5Q91XZ5 Gm15820-201ENSMUST00000201566 728 ntBASIC26.58■■□□□ 1.85
Pcdhb5Q91XZ5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.58■■□□□ 1.85
Pcdhb5Q91XZ5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Pcdhb5Q91XZ5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Pcdhb5Q91XZ5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Pcdhb5Q91XZ5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb5Q91XZ5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.57■■□□□ 1.84
Pcdhb5Q91XZ5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb5Q91XZ5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Pcdhb5Q91XZ5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb5Q91XZ5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhb5Q91XZ5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhb5Q91XZ5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhb5Q91XZ5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.55■■□□□ 1.84
Pcdhb5Q91XZ5 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.55■■□□□ 1.84
Pcdhb5Q91XZ5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhb5Q91XZ5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb5Q91XZ5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb5Q91XZ5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Pcdhb5Q91XZ5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.54■■□□□ 1.84
Pcdhb5Q91XZ5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb5Q91XZ5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.54■■□□□ 1.84
Pcdhb5Q91XZ5 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.54■■□□□ 1.84
Pcdhb5Q91XZ5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb5Q91XZ5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb5Q91XZ5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb5Q91XZ5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.53■■□□□ 1.84
Pcdhb5Q91XZ5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb5Q91XZ5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb5Q91XZ5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.53■■□□□ 1.84
Pcdhb5Q91XZ5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Pcdhb5Q91XZ5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Pcdhb5Q91XZ5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Pcdhb5Q91XZ5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdhb5Q91XZ5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Pcdhb5Q91XZ5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdhb5Q91XZ5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdhb5Q91XZ5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC26.5■■□□□ 1.83
Pcdhb5Q91XZ5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhb5Q91XZ5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Pcdhb5Q91XZ5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Pcdhb5Q91XZ5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Pcdhb5Q91XZ5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC26.49■■□□□ 1.83
Pcdhb5Q91XZ5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.49■■□□□ 1.83
Pcdhb5Q91XZ5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhb5Q91XZ5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhb5Q91XZ5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb5Q91XZ5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb5Q91XZ5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Pcdhb5Q91XZ5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb5Q91XZ5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb5Q91XZ5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb5Q91XZ5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.47■■□□□ 1.83
Pcdhb5Q91XZ5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb5Q91XZ5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Pcdhb5Q91XZ5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhb5Q91XZ5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.46■■□□□ 1.83
Pcdhb5Q91XZ5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhb5Q91XZ5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhb5Q91XZ5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhb5Q91XZ5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pcdhb5Q91XZ5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Pcdhb5Q91XZ5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdhb5Q91XZ5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdhb5Q91XZ5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdhb5Q91XZ5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdhb5Q91XZ5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdhb5Q91XZ5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Pcdhb5Q91XZ5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC26.43■■□□□ 1.82
Pcdhb5Q91XZ5 Rps24-207ENSMUST00000224568 714 ntBASIC26.43■■□□□ 1.82
Pcdhb5Q91XZ5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhb5Q91XZ5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhb5Q91XZ5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhb5Q91XZ5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Pcdhb5Q91XZ5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhb5Q91XZ5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhb5Q91XZ5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhb5Q91XZ5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhb5Q91XZ5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdhb5Q91XZ5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdhb5Q91XZ5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdhb5Q91XZ5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Pcdhb5Q91XZ5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms