Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgc3Q91XX1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgc3Q91XX1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgc3Q91XX1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhgc3Q91XX1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc3Q91XX1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc3Q91XX1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Pcdhgc3Q91XX1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc3Q91XX1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc3Q91XX1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc3Q91XX1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhgc3Q91XX1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhgc3Q91XX1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgc3Q91XX1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhgc3Q91XX1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhgc3Q91XX1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgc3Q91XX1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pcdhgc3Q91XX1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgc3Q91XX1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgc3Q91XX1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgc3Q91XX1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgc3Q91XX1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhgc3Q91XX1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgc3Q91XX1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgc3Q91XX1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgc3Q91XX1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgc3Q91XX1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhgc3Q91XX1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21■□□□□ 0.95
Pcdhgc3Q91XX1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgc3Q91XX1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcdhgc3Q91XX1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Pcdhgc3Q91XX1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgc3Q91XX1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdhgc3Q91XX1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc3Q91XX1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc3Q91XX1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc3Q91XX1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc3Q91XX1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgc3Q91XX1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
Pcdhgc3Q91XX1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcdhgc3Q91XX1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgc3Q91XX1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgc3Q91XX1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.97■□□□□ 0.95
Pcdhgc3Q91XX1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgc3Q91XX1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgc3Q91XX1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhgc3Q91XX1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhgc3Q91XX1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgc3Q91XX1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhgc3Q91XX1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc3Q91XX1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc3Q91XX1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc3Q91XX1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Pcdhgc3Q91XX1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc3Q91XX1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc3Q91XX1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgc3Q91XX1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdhgc3Q91XX1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgc3Q91XX1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgc3Q91XX1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhgc3Q91XX1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhgc3Q91XX1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc3Q91XX1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc3Q91XX1 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.93■□□□□ 0.94
Pcdhgc3Q91XX1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc3Q91XX1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc3Q91XX1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc3Q91XX1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdhgc3Q91XX1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc3Q91XX1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc3Q91XX1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pcdhgc3Q91XX1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgc3Q91XX1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgc3Q91XX1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgc3Q91XX1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgc3Q91XX1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgc3Q91XX1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.89■□□□□ 0.93
Pcdhgc3Q91XX1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgc3Q91XX1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.89■□□□□ 0.93
Pcdhgc3Q91XX1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhgc3Q91XX1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.89■□□□□ 0.93
Pcdhgc3Q91XX1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhgc3Q91XX1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgc3Q91XX1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgc3Q91XX1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgc3Q91XX1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgc3Q91XX1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgc3Q91XX1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdhgc3Q91XX1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdhgc3Q91XX1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgc3Q91XX1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgc3Q91XX1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgc3Q91XX1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Pcdhgc3Q91XX1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgc3Q91XX1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc3Q91XX1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc3Q91XX1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc3Q91XX1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc3Q91XX1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc3Q91XX1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms