Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22■■□□□ 1.11
Treml1Q8K558 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Treml1Q8K558 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Treml1Q8K558 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Treml1Q8K558 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Treml1Q8K558 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Treml1Q8K558 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.99■■□□□ 1.11
Treml1Q8K558 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Treml1Q8K558 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Treml1Q8K558 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.99■■□□□ 1.11
Treml1Q8K558 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Treml1Q8K558 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Treml1Q8K558 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Treml1Q8K558 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Treml1Q8K558 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.97■■□□□ 1.11
Treml1Q8K558 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Treml1Q8K558 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Treml1Q8K558 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Treml1Q8K558 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Treml1Q8K558 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Treml1Q8K558 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Treml1Q8K558 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Treml1Q8K558 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Treml1Q8K558 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Treml1Q8K558 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Treml1Q8K558 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Treml1Q8K558 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Treml1Q8K558 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Treml1Q8K558 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.95■■□□□ 1.1
Treml1Q8K558 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Treml1Q8K558 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Treml1Q8K558 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Treml1Q8K558 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Treml1Q8K558 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.94■■□□□ 1.1
Treml1Q8K558 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.94■■□□□ 1.1
Treml1Q8K558 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Treml1Q8K558 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Treml1Q8K558 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Treml1Q8K558 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Treml1Q8K558 Cap2-205ENSMUST00000225824 1634 ntBASIC21.92■■□□□ 1.1
Treml1Q8K558 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Treml1Q8K558 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Treml1Q8K558 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Treml1Q8K558 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Treml1Q8K558 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Treml1Q8K558 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Treml1Q8K558 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.91■■□□□ 1.1
Treml1Q8K558 Gm12366-201ENSMUST00000121722 873 ntBASIC21.91■■□□□ 1.1
Treml1Q8K558 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.91■■□□□ 1.1
Treml1Q8K558 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.91■■□□□ 1.1
Treml1Q8K558 Gm5786-201ENSMUST00000085368 882 ntBASIC21.91■■□□□ 1.1
Treml1Q8K558 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Treml1Q8K558 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.9■■□□□ 1.1
Treml1Q8K558 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Treml1Q8K558 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Treml1Q8K558 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Treml1Q8K558 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Treml1Q8K558 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Treml1Q8K558 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Treml1Q8K558 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
Treml1Q8K558 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Treml1Q8K558 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.88■■□□□ 1.09
Treml1Q8K558 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Treml1Q8K558 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Treml1Q8K558 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Treml1Q8K558 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.87■■□□□ 1.09
Treml1Q8K558 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Treml1Q8K558 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Treml1Q8K558 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Treml1Q8K558 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Treml1Q8K558 Gm44428-201ENSMUST00000204474 874 ntBASIC21.87■■□□□ 1.09
Treml1Q8K558 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Treml1Q8K558 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.87■■□□□ 1.09
Treml1Q8K558 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Treml1Q8K558 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.87■■□□□ 1.09
Treml1Q8K558 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Treml1Q8K558 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Treml1Q8K558 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.86■■□□□ 1.09
Treml1Q8K558 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.86■■□□□ 1.09
Treml1Q8K558 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.86■■□□□ 1.09
Treml1Q8K558 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Treml1Q8K558 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Treml1Q8K558 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Treml1Q8K558 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
Treml1Q8K558 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.85■■□□□ 1.09
Treml1Q8K558 Gm14523-201ENSMUST00000117260 558 ntBASIC21.85■■□□□ 1.09
Treml1Q8K558 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Treml1Q8K558 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Treml1Q8K558 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Treml1Q8K558 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Treml1Q8K558 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Treml1Q8K558 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Treml1Q8K558 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
Treml1Q8K558 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Treml1Q8K558 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Treml1Q8K558 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Treml1Q8K558 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Treml1Q8K558 Gm7332-201ENSMUST00000118351 454 ntBASIC21.83■■□□□ 1.09
Treml1Q8K558 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Treml1Q8K558 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms