Protein–RNA interactions for Protein: Q8K4Q6

Neil1, Endonuclease 8-like 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Neil1Q8K4Q6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Neil1Q8K4Q6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Neil1Q8K4Q6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Neil1Q8K4Q6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Neil1Q8K4Q6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Neil1Q8K4Q6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Neil1Q8K4Q6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Neil1Q8K4Q6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Neil1Q8K4Q6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Neil1Q8K4Q6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Neil1Q8K4Q6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Neil1Q8K4Q6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Neil1Q8K4Q6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Neil1Q8K4Q6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Neil1Q8K4Q6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Neil1Q8K4Q6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Neil1Q8K4Q6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Neil1Q8K4Q6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Neil1Q8K4Q6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Neil1Q8K4Q6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Neil1Q8K4Q6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Neil1Q8K4Q6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Neil1Q8K4Q6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Neil1Q8K4Q6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Neil1Q8K4Q6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.31■□□□□ 0.68
Neil1Q8K4Q6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Neil1Q8K4Q6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Neil1Q8K4Q6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Neil1Q8K4Q6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Neil1Q8K4Q6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Neil1Q8K4Q6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Neil1Q8K4Q6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.3■□□□□ 0.68
Neil1Q8K4Q6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.3■□□□□ 0.68
Neil1Q8K4Q6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Neil1Q8K4Q6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Neil1Q8K4Q6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Neil1Q8K4Q6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Neil1Q8K4Q6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Neil1Q8K4Q6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Neil1Q8K4Q6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Neil1Q8K4Q6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Neil1Q8K4Q6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Neil1Q8K4Q6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Neil1Q8K4Q6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Neil1Q8K4Q6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.28■□□□□ 0.68
Neil1Q8K4Q6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Neil1Q8K4Q6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Neil1Q8K4Q6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Neil1Q8K4Q6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Neil1Q8K4Q6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Neil1Q8K4Q6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.27■□□□□ 0.68
Neil1Q8K4Q6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Neil1Q8K4Q6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.27■□□□□ 0.68
Neil1Q8K4Q6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Neil1Q8K4Q6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Neil1Q8K4Q6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Neil1Q8K4Q6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Neil1Q8K4Q6 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.26■□□□□ 0.67
Neil1Q8K4Q6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Neil1Q8K4Q6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Neil1Q8K4Q6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Neil1Q8K4Q6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Neil1Q8K4Q6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Neil1Q8K4Q6 Gm11599-201ENSMUST00000118720 878 ntBASIC19.25■□□□□ 0.67
Neil1Q8K4Q6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.25■□□□□ 0.67
Neil1Q8K4Q6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.25■□□□□ 0.67
Neil1Q8K4Q6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Neil1Q8K4Q6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.25■□□□□ 0.67
Neil1Q8K4Q6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Neil1Q8K4Q6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.25■□□□□ 0.67
Neil1Q8K4Q6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Neil1Q8K4Q6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Neil1Q8K4Q6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.24■□□□□ 0.67
Neil1Q8K4Q6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.24■□□□□ 0.67
Neil1Q8K4Q6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Neil1Q8K4Q6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.23■□□□□ 0.67
Neil1Q8K4Q6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Neil1Q8K4Q6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Neil1Q8K4Q6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Neil1Q8K4Q6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Neil1Q8K4Q6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Neil1Q8K4Q6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Neil1Q8K4Q6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Neil1Q8K4Q6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Neil1Q8K4Q6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Neil1Q8K4Q6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Neil1Q8K4Q6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Neil1Q8K4Q6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
Neil1Q8K4Q6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Neil1Q8K4Q6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Neil1Q8K4Q6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Neil1Q8K4Q6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Neil1Q8K4Q6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Neil1Q8K4Q6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Neil1Q8K4Q6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Neil1Q8K4Q6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.18■□□□□ 0.66
Neil1Q8K4Q6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Neil1Q8K4Q6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Neil1Q8K4Q6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.18■□□□□ 0.66
Neil1Q8K4Q6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms