Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Rfwd3Q8CIK8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfwd3Q8CIK8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfwd3Q8CIK8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfwd3Q8CIK8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfwd3Q8CIK8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rfwd3Q8CIK8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfwd3Q8CIK8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfwd3Q8CIK8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfwd3Q8CIK8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfwd3Q8CIK8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfwd3Q8CIK8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.81■□□□□ 0.92
Rfwd3Q8CIK8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Rfwd3Q8CIK8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfwd3Q8CIK8 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.8■□□□□ 0.92
Rfwd3Q8CIK8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.8■□□□□ 0.92
Rfwd3Q8CIK8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfwd3Q8CIK8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Rfwd3Q8CIK8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfwd3Q8CIK8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rfwd3Q8CIK8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rfwd3Q8CIK8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfwd3Q8CIK8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfwd3Q8CIK8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfwd3Q8CIK8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfwd3Q8CIK8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfwd3Q8CIK8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfwd3Q8CIK8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Rfwd3Q8CIK8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfwd3Q8CIK8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfwd3Q8CIK8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rfwd3Q8CIK8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfwd3Q8CIK8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.77■□□□□ 0.92
Rfwd3Q8CIK8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.77■□□□□ 0.92
Rfwd3Q8CIK8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfwd3Q8CIK8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfwd3Q8CIK8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfwd3Q8CIK8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfwd3Q8CIK8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfwd3Q8CIK8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rfwd3Q8CIK8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.76■□□□□ 0.91
Rfwd3Q8CIK8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfwd3Q8CIK8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfwd3Q8CIK8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfwd3Q8CIK8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfwd3Q8CIK8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.75■□□□□ 0.91
Rfwd3Q8CIK8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.75■□□□□ 0.91
Rfwd3Q8CIK8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfwd3Q8CIK8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfwd3Q8CIK8 Gm44428-201ENSMUST00000204474 874 ntBASIC20.75■□□□□ 0.91
Rfwd3Q8CIK8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Rfwd3Q8CIK8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rfwd3Q8CIK8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfwd3Q8CIK8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Rfwd3Q8CIK8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfwd3Q8CIK8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Rfwd3Q8CIK8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.74■□□□□ 0.91
Rfwd3Q8CIK8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Rfwd3Q8CIK8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rfwd3Q8CIK8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd3Q8CIK8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.73■□□□□ 0.91
Rfwd3Q8CIK8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd3Q8CIK8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd3Q8CIK8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd3Q8CIK8 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.73■□□□□ 0.91
Rfwd3Q8CIK8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.73■□□□□ 0.91
Rfwd3Q8CIK8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd3Q8CIK8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfwd3Q8CIK8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfwd3Q8CIK8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rfwd3Q8CIK8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfwd3Q8CIK8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfwd3Q8CIK8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfwd3Q8CIK8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd3Q8CIK8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Rfwd3Q8CIK8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rfwd3Q8CIK8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd3Q8CIK8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.71■□□□□ 0.91
Rfwd3Q8CIK8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd3Q8CIK8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfwd3Q8CIK8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rfwd3Q8CIK8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfwd3Q8CIK8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.7■□□□□ 0.9
Rfwd3Q8CIK8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.7■□□□□ 0.9
Rfwd3Q8CIK8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfwd3Q8CIK8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfwd3Q8CIK8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfwd3Q8CIK8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfwd3Q8CIK8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfwd3Q8CIK8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rfwd3Q8CIK8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rfwd3Q8CIK8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rfwd3Q8CIK8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfwd3Q8CIK8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
Rfwd3Q8CIK8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.68■□□□□ 0.9
Rfwd3Q8CIK8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfwd3Q8CIK8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfwd3Q8CIK8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd3Q8CIK8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd3Q8CIK8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms