Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
Smc5Q8CG46 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Smc5Q8CG46 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Smc5Q8CG46 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Smc5Q8CG46 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Smc5Q8CG46 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Smc5Q8CG46 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Smc5Q8CG46 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Smc5Q8CG46 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Smc5Q8CG46 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Smc5Q8CG46 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC27.8■■■□□ 2.04
Smc5Q8CG46 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC27.79■■■□□ 2.04
Smc5Q8CG46 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Smc5Q8CG46 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Smc5Q8CG46 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Smc5Q8CG46 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Smc5Q8CG46 Gm6821-201ENSMUST00000107540 542 ntBASIC27.78■■■□□ 2.04
Smc5Q8CG46 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Smc5Q8CG46 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Smc5Q8CG46 Dmtn-209ENSMUST00000228295 2572 ntBASIC27.78■■■□□ 2.04
Smc5Q8CG46 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Smc5Q8CG46 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Smc5Q8CG46 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Smc5Q8CG46 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Smc5Q8CG46 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.77■■■□□ 2.04
Smc5Q8CG46 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.77■■■□□ 2.04
Smc5Q8CG46 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
Smc5Q8CG46 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Smc5Q8CG46 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Smc5Q8CG46 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
Smc5Q8CG46 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Smc5Q8CG46 Gm26766-202ENSMUST00000227544 2347 ntBASIC27.74■■■□□ 2.03
Smc5Q8CG46 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Smc5Q8CG46 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Smc5Q8CG46 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Smc5Q8CG46 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Smc5Q8CG46 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC27.73■■■□□ 2.03
Smc5Q8CG46 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Smc5Q8CG46 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.73■■■□□ 2.03
Smc5Q8CG46 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.73■■■□□ 2.03
Smc5Q8CG46 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Smc5Q8CG46 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Smc5Q8CG46 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.73■■■□□ 2.03
Smc5Q8CG46 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.72■■■□□ 2.03
Smc5Q8CG46 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Smc5Q8CG46 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Smc5Q8CG46 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Smc5Q8CG46 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Smc5Q8CG46 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
Smc5Q8CG46 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.7■■■□□ 2.02
Smc5Q8CG46 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Smc5Q8CG46 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Smc5Q8CG46 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC27.7■■■□□ 2.02
Smc5Q8CG46 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Smc5Q8CG46 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Smc5Q8CG46 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Smc5Q8CG46 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Smc5Q8CG46 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
Smc5Q8CG46 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Smc5Q8CG46 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Smc5Q8CG46 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Smc5Q8CG46 Gm28731-201ENSMUST00000185564 1569 ntBASIC27.68■■■□□ 2.02
Smc5Q8CG46 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Smc5Q8CG46 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.67■■■□□ 2.02
Smc5Q8CG46 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Smc5Q8CG46 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Smc5Q8CG46 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Smc5Q8CG46 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
Smc5Q8CG46 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC27.65■■■□□ 2.02
Smc5Q8CG46 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Smc5Q8CG46 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Smc5Q8CG46 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Smc5Q8CG46 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
Smc5Q8CG46 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
Smc5Q8CG46 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Smc5Q8CG46 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
Smc5Q8CG46 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Smc5Q8CG46 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Smc5Q8CG46 Gm8503-201ENSMUST00000118131 455 ntBASIC27.63■■■□□ 2.01
Smc5Q8CG46 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
Smc5Q8CG46 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Smc5Q8CG46 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC27.62■■■□□ 2.01
Smc5Q8CG46 Gm9812-201ENSMUST00000061934 968 ntBASIC27.62■■■□□ 2.01
Smc5Q8CG46 Gm13042-201ENSMUST00000119244 1955 ntBASIC27.62■■■□□ 2.01
Smc5Q8CG46 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
Smc5Q8CG46 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
Smc5Q8CG46 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
Smc5Q8CG46 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC27.6■■■□□ 2.01
Smc5Q8CG46 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC27.6■■■□□ 2.01
Smc5Q8CG46 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC27.6■■■□□ 2.01
Smc5Q8CG46 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC27.6■■■□□ 2.01
Smc5Q8CG46 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Smc5Q8CG46 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Smc5Q8CG46 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Smc5Q8CG46 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.6■■■□□ 2.01
Smc5Q8CG46 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Smc5Q8CG46 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Smc5Q8CG46 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Smc5Q8CG46 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.59■■■□□ 2.01
Smc5Q8CG46 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 165.8 ms