Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.52■□□□□ 0.88
Slc49a3Q8CE47 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Slc49a3Q8CE47 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc49a3Q8CE47 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc49a3Q8CE47 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Slc49a3Q8CE47 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.51■□□□□ 0.87
Slc49a3Q8CE47 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
Slc49a3Q8CE47 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.5■□□□□ 0.87
Slc49a3Q8CE47 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc49a3Q8CE47 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.5■□□□□ 0.87
Slc49a3Q8CE47 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc49a3Q8CE47 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc49a3Q8CE47 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Slc49a3Q8CE47 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc49a3Q8CE47 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc49a3Q8CE47 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc49a3Q8CE47 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc49a3Q8CE47 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Slc49a3Q8CE47 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.48■□□□□ 0.87
Slc49a3Q8CE47 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Slc49a3Q8CE47 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Slc49a3Q8CE47 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc49a3Q8CE47 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.47■□□□□ 0.87
Slc49a3Q8CE47 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Slc49a3Q8CE47 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc49a3Q8CE47 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc49a3Q8CE47 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc49a3Q8CE47 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.46■□□□□ 0.87
Slc49a3Q8CE47 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc49a3Q8CE47 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.46■□□□□ 0.87
Slc49a3Q8CE47 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc49a3Q8CE47 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc49a3Q8CE47 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc49a3Q8CE47 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slc49a3Q8CE47 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.45■□□□□ 0.86
Slc49a3Q8CE47 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc49a3Q8CE47 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.44■□□□□ 0.86
Slc49a3Q8CE47 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc49a3Q8CE47 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc49a3Q8CE47 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.44■□□□□ 0.86
Slc49a3Q8CE47 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc49a3Q8CE47 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Slc49a3Q8CE47 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc49a3Q8CE47 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc49a3Q8CE47 Gm24970-201ENSMUST00000175582 82 ntBASIC20.43■□□□□ 0.86
Slc49a3Q8CE47 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc49a3Q8CE47 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc49a3Q8CE47 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc49a3Q8CE47 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc49a3Q8CE47 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc49a3Q8CE47 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Slc49a3Q8CE47 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Slc49a3Q8CE47 Gm9397-201ENSMUST00000200125 605 ntBASIC20.41■□□□□ 0.86
Slc49a3Q8CE47 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc49a3Q8CE47 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Slc49a3Q8CE47 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc49a3Q8CE47 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc49a3Q8CE47 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc49a3Q8CE47 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc49a3Q8CE47 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc49a3Q8CE47 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc49a3Q8CE47 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc49a3Q8CE47 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc49a3Q8CE47 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc49a3Q8CE47 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Slc49a3Q8CE47 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Slc49a3Q8CE47 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc49a3Q8CE47 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc49a3Q8CE47 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc49a3Q8CE47 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc49a3Q8CE47 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc49a3Q8CE47 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc49a3Q8CE47 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Slc49a3Q8CE47 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc49a3Q8CE47 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc49a3Q8CE47 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc49a3Q8CE47 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Slc49a3Q8CE47 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.35■□□□□ 0.85
Slc49a3Q8CE47 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Slc49a3Q8CE47 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc49a3Q8CE47 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Slc49a3Q8CE47 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Slc49a3Q8CE47 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Slc49a3Q8CE47 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Slc49a3Q8CE47 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc49a3Q8CE47 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc49a3Q8CE47 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Slc49a3Q8CE47 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc49a3Q8CE47 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc49a3Q8CE47 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc49a3Q8CE47 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc49a3Q8CE47 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.31■□□□□ 0.84
Slc49a3Q8CE47 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Slc49a3Q8CE47 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc49a3Q8CE47 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.31■□□□□ 0.84
Slc49a3Q8CE47 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.31■□□□□ 0.84
Slc49a3Q8CE47 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc49a3Q8CE47 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc49a3Q8CE47 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc49a3Q8CE47 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms