Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp44Q8C2S0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp44Q8C2S0 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.43■■□□□ 1.82
Usp44Q8C2S0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Usp44Q8C2S0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.43■■□□□ 1.82
Usp44Q8C2S0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Usp44Q8C2S0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
Usp44Q8C2S0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Usp44Q8C2S0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Usp44Q8C2S0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Usp44Q8C2S0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Usp44Q8C2S0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.41■■□□□ 1.82
Usp44Q8C2S0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Usp44Q8C2S0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Usp44Q8C2S0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Usp44Q8C2S0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Usp44Q8C2S0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Usp44Q8C2S0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Usp44Q8C2S0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Usp44Q8C2S0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Usp44Q8C2S0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Usp44Q8C2S0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Usp44Q8C2S0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Usp44Q8C2S0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Usp44Q8C2S0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.37■■□□□ 1.81
Usp44Q8C2S0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Usp44Q8C2S0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.37■■□□□ 1.81
Usp44Q8C2S0 Gm44428-201ENSMUST00000204474 874 ntBASIC26.37■■□□□ 1.81
Usp44Q8C2S0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Usp44Q8C2S0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Usp44Q8C2S0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Usp44Q8C2S0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
Usp44Q8C2S0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Usp44Q8C2S0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Usp44Q8C2S0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.34■■□□□ 1.81
Usp44Q8C2S0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Usp44Q8C2S0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Usp44Q8C2S0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.33■■□□□ 1.81
Usp44Q8C2S0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Usp44Q8C2S0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Usp44Q8C2S0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Usp44Q8C2S0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Usp44Q8C2S0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Usp44Q8C2S0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Usp44Q8C2S0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Usp44Q8C2S0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.3■■□□□ 1.8
Usp44Q8C2S0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Usp44Q8C2S0 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.29■■□□□ 1.8
Usp44Q8C2S0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Usp44Q8C2S0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp44Q8C2S0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Usp44Q8C2S0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.29■■□□□ 1.8
Usp44Q8C2S0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp44Q8C2S0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Usp44Q8C2S0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
Usp44Q8C2S0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Usp44Q8C2S0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.28■■□□□ 1.8
Usp44Q8C2S0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Usp44Q8C2S0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Usp44Q8C2S0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp44Q8C2S0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp44Q8C2S0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp44Q8C2S0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Usp44Q8C2S0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.26■■□□□ 1.79
Usp44Q8C2S0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Usp44Q8C2S0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp44Q8C2S0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Usp44Q8C2S0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp44Q8C2S0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Usp44Q8C2S0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp44Q8C2S0 Mir6538-201ENSMUST00000183713 110 ntBASIC26.25■■□□□ 1.79
Usp44Q8C2S0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.24■■□□□ 1.79
Usp44Q8C2S0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Usp44Q8C2S0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp44Q8C2S0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Usp44Q8C2S0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
Usp44Q8C2S0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Usp44Q8C2S0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp44Q8C2S0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Usp44Q8C2S0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Usp44Q8C2S0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Usp44Q8C2S0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Usp44Q8C2S0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.21■■□□□ 1.79
Usp44Q8C2S0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Usp44Q8C2S0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Usp44Q8C2S0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Usp44Q8C2S0 Gm27502-201ENSMUST00000183495 199 ntBASIC26.21■■□□□ 1.79
Usp44Q8C2S0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Usp44Q8C2S0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Usp44Q8C2S0 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.19■■□□□ 1.78
Usp44Q8C2S0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp44Q8C2S0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Usp44Q8C2S0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Usp44Q8C2S0 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.18■■□□□ 1.78
Usp44Q8C2S0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Usp44Q8C2S0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp44Q8C2S0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Usp44Q8C2S0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp44Q8C2S0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Usp44Q8C2S0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.17■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms