Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Trub1Q8C0D0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trub1Q8C0D0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.09■■□□□ 1.29
Trub1Q8C0D0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trub1Q8C0D0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Trub1Q8C0D0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trub1Q8C0D0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Trub1Q8C0D0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
Trub1Q8C0D0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trub1Q8C0D0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Trub1Q8C0D0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Trub1Q8C0D0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.06■■□□□ 1.28
Trub1Q8C0D0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trub1Q8C0D0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.06■■□□□ 1.28
Trub1Q8C0D0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trub1Q8C0D0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trub1Q8C0D0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.05■■□□□ 1.28
Trub1Q8C0D0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trub1Q8C0D0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trub1Q8C0D0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trub1Q8C0D0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trub1Q8C0D0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trub1Q8C0D0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trub1Q8C0D0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trub1Q8C0D0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trub1Q8C0D0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trub1Q8C0D0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Trub1Q8C0D0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trub1Q8C0D0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trub1Q8C0D0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trub1Q8C0D0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trub1Q8C0D0 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.02■■□□□ 1.28
Trub1Q8C0D0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.01■■□□□ 1.27
Trub1Q8C0D0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trub1Q8C0D0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trub1Q8C0D0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trub1Q8C0D0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trub1Q8C0D0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trub1Q8C0D0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Trub1Q8C0D0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Trub1Q8C0D0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trub1Q8C0D0 Scarna2-201ENSMUST00000157560 414 ntBASIC23■■□□□ 1.27
Trub1Q8C0D0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trub1Q8C0D0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trub1Q8C0D0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
Trub1Q8C0D0 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.99■■□□□ 1.27
Trub1Q8C0D0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.99■■□□□ 1.27
Trub1Q8C0D0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trub1Q8C0D0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.99■■□□□ 1.27
Trub1Q8C0D0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trub1Q8C0D0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trub1Q8C0D0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trub1Q8C0D0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Trub1Q8C0D0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.98■■□□□ 1.27
Trub1Q8C0D0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trub1Q8C0D0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.98■■□□□ 1.27
Trub1Q8C0D0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trub1Q8C0D0 Gm9806-201ENSMUST00000051080 552 ntBASIC22.97■■□□□ 1.27
Trub1Q8C0D0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trub1Q8C0D0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trub1Q8C0D0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.96■■□□□ 1.27
Trub1Q8C0D0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trub1Q8C0D0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Trub1Q8C0D0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Trub1Q8C0D0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trub1Q8C0D0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Trub1Q8C0D0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trub1Q8C0D0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.96■■□□□ 1.27
Trub1Q8C0D0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trub1Q8C0D0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.95■■□□□ 1.26
Trub1Q8C0D0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Trub1Q8C0D0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trub1Q8C0D0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Trub1Q8C0D0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trub1Q8C0D0 Gm16437-201ENSMUST00000025669 507 ntBASIC22.95■■□□□ 1.26
Trub1Q8C0D0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trub1Q8C0D0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trub1Q8C0D0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trub1Q8C0D0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trub1Q8C0D0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.94■■□□□ 1.26
Trub1Q8C0D0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trub1Q8C0D0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Trub1Q8C0D0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trub1Q8C0D0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.92■■□□□ 1.26
Trub1Q8C0D0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trub1Q8C0D0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trub1Q8C0D0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Trub1Q8C0D0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trub1Q8C0D0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trub1Q8C0D0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.91■■□□□ 1.26
Trub1Q8C0D0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trub1Q8C0D0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trub1Q8C0D0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trub1Q8C0D0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Trub1Q8C0D0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trub1Q8C0D0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Trub1Q8C0D0 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.89■■□□□ 1.25
Trub1Q8C0D0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Trub1Q8C0D0 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.89■■□□□ 1.25
Trub1Q8C0D0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms