Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gm11687-201ENSMUST00000118911 886 ntBASIC22.63■■□□□ 1.21
Suds3Q8BR65 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Suds3Q8BR65 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Suds3Q8BR65 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Suds3Q8BR65 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Suds3Q8BR65 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Suds3Q8BR65 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Suds3Q8BR65 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Suds3Q8BR65 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Suds3Q8BR65 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Suds3Q8BR65 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Suds3Q8BR65 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Suds3Q8BR65 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Suds3Q8BR65 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Suds3Q8BR65 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.59■■□□□ 1.21
Suds3Q8BR65 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Suds3Q8BR65 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.59■■□□□ 1.21
Suds3Q8BR65 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Suds3Q8BR65 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Suds3Q8BR65 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Suds3Q8BR65 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Suds3Q8BR65 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Suds3Q8BR65 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
Suds3Q8BR65 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Suds3Q8BR65 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Suds3Q8BR65 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Suds3Q8BR65 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.57■■□□□ 1.2
Suds3Q8BR65 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Suds3Q8BR65 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Suds3Q8BR65 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
Suds3Q8BR65 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Suds3Q8BR65 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Suds3Q8BR65 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Suds3Q8BR65 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.56■■□□□ 1.2
Suds3Q8BR65 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Suds3Q8BR65 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Suds3Q8BR65 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Suds3Q8BR65 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Suds3Q8BR65 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.55■■□□□ 1.2
Suds3Q8BR65 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Suds3Q8BR65 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Suds3Q8BR65 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Suds3Q8BR65 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
Suds3Q8BR65 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Suds3Q8BR65 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.55■■□□□ 1.2
Suds3Q8BR65 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Suds3Q8BR65 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.55■■□□□ 1.2
Suds3Q8BR65 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.55■■□□□ 1.2
Suds3Q8BR65 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Suds3Q8BR65 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Suds3Q8BR65 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Suds3Q8BR65 Gm9812-201ENSMUST00000061934 968 ntBASIC22.54■■□□□ 1.2
Suds3Q8BR65 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC22.54■■□□□ 1.2
Suds3Q8BR65 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Suds3Q8BR65 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Suds3Q8BR65 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Suds3Q8BR65 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.53■■□□□ 1.2
Suds3Q8BR65 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Suds3Q8BR65 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Suds3Q8BR65 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Suds3Q8BR65 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.52■■□□□ 1.2
Suds3Q8BR65 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Suds3Q8BR65 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Suds3Q8BR65 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.51■■□□□ 1.19
Suds3Q8BR65 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.51■■□□□ 1.19
Suds3Q8BR65 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.5■■□□□ 1.19
Suds3Q8BR65 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Suds3Q8BR65 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.5■■□□□ 1.19
Suds3Q8BR65 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.5■■□□□ 1.19
Suds3Q8BR65 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Suds3Q8BR65 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Suds3Q8BR65 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Suds3Q8BR65 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
Suds3Q8BR65 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Suds3Q8BR65 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Suds3Q8BR65 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Suds3Q8BR65 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Suds3Q8BR65 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Suds3Q8BR65 Cap2-205ENSMUST00000225824 1634 ntBASIC22.49■■□□□ 1.19
Suds3Q8BR65 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Suds3Q8BR65 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Suds3Q8BR65 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.48■■□□□ 1.19
Suds3Q8BR65 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Suds3Q8BR65 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Suds3Q8BR65 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Suds3Q8BR65 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Suds3Q8BR65 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.47■■□□□ 1.19
Suds3Q8BR65 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Suds3Q8BR65 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Suds3Q8BR65 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Suds3Q8BR65 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Suds3Q8BR65 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Suds3Q8BR65 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.46■■□□□ 1.19
Suds3Q8BR65 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Suds3Q8BR65 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Suds3Q8BR65 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Suds3Q8BR65 Gm27502-201ENSMUST00000183495 199 ntBASIC22.45■■□□□ 1.18
Suds3Q8BR65 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.45■■□□□ 1.18
Suds3Q8BR65 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.45■■□□□ 1.18
Suds3Q8BR65 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms