Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18,34■□□□□ 0,53
Smco3Q8BQM7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18,34■□□□□ 0,53
Smco3Q8BQM7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18,33■□□□□ 0,53
Smco3Q8BQM7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18,33■□□□□ 0,53
Smco3Q8BQM7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18,33■□□□□ 0,53
Smco3Q8BQM7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18,33■□□□□ 0,53
Smco3Q8BQM7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18,33■□□□□ 0,52
Smco3Q8BQM7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18,33■□□□□ 0,52
Smco3Q8BQM7 Gm42699-201ENSMUST00000198104 1657 ntBASIC18,33■□□□□ 0,52
Smco3Q8BQM7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18,33■□□□□ 0,52
Smco3Q8BQM7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18,33■□□□□ 0,52
Smco3Q8BQM7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18,33■□□□□ 0,52
Smco3Q8BQM7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18,32■□□□□ 0,52
Smco3Q8BQM7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18,32■□□□□ 0,52
Smco3Q8BQM7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18,32■□□□□ 0,52
Smco3Q8BQM7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18,32■□□□□ 0,52
Smco3Q8BQM7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18,32■□□□□ 0,52
Smco3Q8BQM7 Gm30023-201ENSMUST00000197970 889 ntBASIC18,32■□□□□ 0,52
Smco3Q8BQM7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18,32■□□□□ 0,52
Smco3Q8BQM7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18,32■□□□□ 0,52
Smco3Q8BQM7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18,31■□□□□ 0,52
Smco3Q8BQM7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18,31■□□□□ 0,52
Smco3Q8BQM7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18,31■□□□□ 0,52
Smco3Q8BQM7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18,31■□□□□ 0,52
Smco3Q8BQM7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18,31■□□□□ 0,52
Smco3Q8BQM7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18,31■□□□□ 0,52
Smco3Q8BQM7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18,3■□□□□ 0,52
Smco3Q8BQM7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18,3■□□□□ 0,52
Smco3Q8BQM7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18,3■□□□□ 0,52
Smco3Q8BQM7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18,3■□□□□ 0,52
Smco3Q8BQM7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18,3■□□□□ 0,52
Smco3Q8BQM7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18,3■□□□□ 0,52
Smco3Q8BQM7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18,29■□□□□ 0,52
Smco3Q8BQM7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18,29■□□□□ 0,52
Smco3Q8BQM7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18,29■□□□□ 0,52
Smco3Q8BQM7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18,29■□□□□ 0,52
Smco3Q8BQM7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18,29■□□□□ 0,52
Smco3Q8BQM7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18,28■□□□□ 0,52
Smco3Q8BQM7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18,28■□□□□ 0,52
Smco3Q8BQM7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18,28■□□□□ 0,52
Smco3Q8BQM7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18,28■□□□□ 0,52
Smco3Q8BQM7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18,28■□□□□ 0,52
Smco3Q8BQM7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18,27■□□□□ 0,52
Smco3Q8BQM7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18,27■□□□□ 0,52
Smco3Q8BQM7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18,27■□□□□ 0,52
Smco3Q8BQM7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18,27■□□□□ 0,52
Smco3Q8BQM7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18,27■□□□□ 0,52
Smco3Q8BQM7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18,27■□□□□ 0,52
Smco3Q8BQM7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18,26■□□□□ 0,51
Smco3Q8BQM7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18,26■□□□□ 0,51
Smco3Q8BQM7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18,26■□□□□ 0,51
Smco3Q8BQM7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18,26■□□□□ 0,51
Smco3Q8BQM7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18,26■□□□□ 0,51
Smco3Q8BQM7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18,26■□□□□ 0,51
Smco3Q8BQM7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18,26■□□□□ 0,51
Smco3Q8BQM7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18,26■□□□□ 0,51
Smco3Q8BQM7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18,26■□□□□ 0,51
Smco3Q8BQM7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18,25■□□□□ 0,51
Smco3Q8BQM7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18,25■□□□□ 0,51
Smco3Q8BQM7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18,25■□□□□ 0,51
Smco3Q8BQM7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18,25■□□□□ 0,51
Smco3Q8BQM7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18,25■□□□□ 0,51
Smco3Q8BQM7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18,25■□□□□ 0,51
Smco3Q8BQM7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18,25■□□□□ 0,51
Smco3Q8BQM7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18,24■□□□□ 0,51
Smco3Q8BQM7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18,24■□□□□ 0,51
Smco3Q8BQM7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18,24■□□□□ 0,51
Smco3Q8BQM7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18,24■□□□□ 0,51
Smco3Q8BQM7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18,24■□□□□ 0,51
Smco3Q8BQM7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18,23■□□□□ 0,51
Smco3Q8BQM7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18,23■□□□□ 0,51
Smco3Q8BQM7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18,23■□□□□ 0,51
Smco3Q8BQM7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18,23■□□□□ 0,51
Smco3Q8BQM7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18,22■□□□□ 0,51
Smco3Q8BQM7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18,22■□□□□ 0,51
Smco3Q8BQM7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18,22■□□□□ 0,51
Smco3Q8BQM7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18,22■□□□□ 0,51
Smco3Q8BQM7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18,22■□□□□ 0,51
Smco3Q8BQM7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18,22■□□□□ 0,51
Smco3Q8BQM7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18,22■□□□□ 0,51
Smco3Q8BQM7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18,21■□□□□ 0,51
Smco3Q8BQM7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18,21■□□□□ 0,51
Smco3Q8BQM7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18,21■□□□□ 0,51
Smco3Q8BQM7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18,2■□□□□ 0,5
Smco3Q8BQM7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18,2■□□□□ 0,5
Smco3Q8BQM7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18,2■□□□□ 0,5
Smco3Q8BQM7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18,2■□□□□ 0,5
Smco3Q8BQM7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18,2■□□□□ 0,5
Smco3Q8BQM7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18,2■□□□□ 0,5
Smco3Q8BQM7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18,19■□□□□ 0,5
Smco3Q8BQM7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18,19■□□□□ 0,5
Smco3Q8BQM7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18,19■□□□□ 0,5
Smco3Q8BQM7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18,19■□□□□ 0,5
Smco3Q8BQM7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18,19■□□□□ 0,5
Smco3Q8BQM7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18,19■□□□□ 0,5
Smco3Q8BQM7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18,19■□□□□ 0,5
Smco3Q8BQM7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18,19■□□□□ 0,5
Smco3Q8BQM7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18,19■□□□□ 0,5
Smco3Q8BQM7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18,19■□□□□ 0,5
Smco3Q8BQM7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18,19■□□□□ 0,5
Retrieved 100 of 76,532 protein–RNA pairs in 8,6 ms