Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atg4bQ8BGE6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atg4bQ8BGE6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.04■□□□□ 0.96
Atg4bQ8BGE6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atg4bQ8BGE6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atg4bQ8BGE6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atg4bQ8BGE6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Atg4bQ8BGE6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atg4bQ8BGE6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.02■□□□□ 0.96
Atg4bQ8BGE6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atg4bQ8BGE6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Atg4bQ8BGE6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atg4bQ8BGE6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Atg4bQ8BGE6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atg4bQ8BGE6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atg4bQ8BGE6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atg4bQ8BGE6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21■□□□□ 0.95
Atg4bQ8BGE6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atg4bQ8BGE6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21■□□□□ 0.95
Atg4bQ8BGE6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21■□□□□ 0.95
Atg4bQ8BGE6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.99■□□□□ 0.95
Atg4bQ8BGE6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atg4bQ8BGE6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atg4bQ8BGE6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Atg4bQ8BGE6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atg4bQ8BGE6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atg4bQ8BGE6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atg4bQ8BGE6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atg4bQ8BGE6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.98■□□□□ 0.95
Atg4bQ8BGE6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.98■□□□□ 0.95
Atg4bQ8BGE6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Atg4bQ8BGE6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4bQ8BGE6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4bQ8BGE6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.97■□□□□ 0.95
Atg4bQ8BGE6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.97■□□□□ 0.95
Atg4bQ8BGE6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Atg4bQ8BGE6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4bQ8BGE6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4bQ8BGE6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4bQ8BGE6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
Atg4bQ8BGE6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4bQ8BGE6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.95■□□□□ 0.94
Atg4bQ8BGE6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4bQ8BGE6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4bQ8BGE6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4bQ8BGE6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4bQ8BGE6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4bQ8BGE6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Atg4bQ8BGE6 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.94■□□□□ 0.94
Atg4bQ8BGE6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4bQ8BGE6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4bQ8BGE6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4bQ8BGE6 Gm44428-201ENSMUST00000204474 874 ntBASIC20.93■□□□□ 0.94
Atg4bQ8BGE6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Atg4bQ8BGE6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4bQ8BGE6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4bQ8BGE6 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.93■□□□□ 0.94
Atg4bQ8BGE6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Atg4bQ8BGE6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.92■□□□□ 0.94
Atg4bQ8BGE6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Atg4bQ8BGE6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Atg4bQ8BGE6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atg4bQ8BGE6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.92■□□□□ 0.94
Atg4bQ8BGE6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atg4bQ8BGE6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.92■□□□□ 0.94
Atg4bQ8BGE6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atg4bQ8BGE6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.91■□□□□ 0.94
Atg4bQ8BGE6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.91■□□□□ 0.94
Atg4bQ8BGE6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.91■□□□□ 0.94
Atg4bQ8BGE6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atg4bQ8BGE6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atg4bQ8BGE6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Atg4bQ8BGE6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atg4bQ8BGE6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atg4bQ8BGE6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atg4bQ8BGE6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Atg4bQ8BGE6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atg4bQ8BGE6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atg4bQ8BGE6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Atg4bQ8BGE6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atg4bQ8BGE6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Atg4bQ8BGE6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atg4bQ8BGE6 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.86■□□□□ 0.93
Atg4bQ8BGE6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Atg4bQ8BGE6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atg4bQ8BGE6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Atg4bQ8BGE6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atg4bQ8BGE6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atg4bQ8BGE6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4bQ8BGE6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4bQ8BGE6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.85■□□□□ 0.93
Atg4bQ8BGE6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4bQ8BGE6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Atg4bQ8BGE6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4bQ8BGE6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Atg4bQ8BGE6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Atg4bQ8BGE6 Mir6538-201ENSMUST00000183713 110 ntBASIC20.84■□□□□ 0.93
Atg4bQ8BGE6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg4bQ8BGE6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg4bQ8BGE6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 152 ms