Protein–RNA interactions for Protein: Q80ZA4

Pkhd1l1, Fibrocystin-L, mousemouse

Predictions only

Length 4,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkhd1l1Q80ZA4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkhd1l1Q80ZA4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkhd1l1Q80ZA4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkhd1l1Q80ZA4 Gm5131-201ENSMUST00000212776 1238 ntBASIC13.72□□□□□ -0.21
Pkhd1l1Q80ZA4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkhd1l1Q80ZA4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pkhd1l1Q80ZA4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.71□□□□□ -0.21
Pkhd1l1Q80ZA4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkhd1l1Q80ZA4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.71□□□□□ -0.22
Pkhd1l1Q80ZA4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Pkhd1l1Q80ZA4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pkhd1l1Q80ZA4 Gm10232-201ENSMUST00000089221 720 ntBASIC13.7□□□□□ -0.22
Pkhd1l1Q80ZA4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pkhd1l1Q80ZA4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Pkhd1l1Q80ZA4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.7□□□□□ -0.22
Pkhd1l1Q80ZA4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pkhd1l1Q80ZA4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.7□□□□□ -0.22
Pkhd1l1Q80ZA4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pkhd1l1Q80ZA4 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.7□□□□□ -0.22
Pkhd1l1Q80ZA4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.69□□□□□ -0.22
Pkhd1l1Q80ZA4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.69□□□□□ -0.22
Pkhd1l1Q80ZA4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.69□□□□□ -0.22
Pkhd1l1Q80ZA4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC13.69□□□□□ -0.22
Pkhd1l1Q80ZA4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pkhd1l1Q80ZA4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pkhd1l1Q80ZA4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pkhd1l1Q80ZA4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC13.69□□□□□ -0.22
Pkhd1l1Q80ZA4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.69□□□□□ -0.22
Pkhd1l1Q80ZA4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pkhd1l1Q80ZA4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pkhd1l1Q80ZA4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Pkhd1l1Q80ZA4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pkhd1l1Q80ZA4 Gm21956-201ENSMUST00000179946 522 ntBASIC13.68□□□□□ -0.22
Pkhd1l1Q80ZA4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC13.68□□□□□ -0.22
Pkhd1l1Q80ZA4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pkhd1l1Q80ZA4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pkhd1l1Q80ZA4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pkhd1l1Q80ZA4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pkhd1l1Q80ZA4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pkhd1l1Q80ZA4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pkhd1l1Q80ZA4 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.66□□□□□ -0.22
Pkhd1l1Q80ZA4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pkhd1l1Q80ZA4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pkhd1l1Q80ZA4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pkhd1l1Q80ZA4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pkhd1l1Q80ZA4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pkhd1l1Q80ZA4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pkhd1l1Q80ZA4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.66□□□□□ -0.22
Pkhd1l1Q80ZA4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pkhd1l1Q80ZA4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pkhd1l1Q80ZA4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pkhd1l1Q80ZA4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.65□□□□□ -0.22
Pkhd1l1Q80ZA4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pkhd1l1Q80ZA4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pkhd1l1Q80ZA4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pkhd1l1Q80ZA4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pkhd1l1Q80ZA4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pkhd1l1Q80ZA4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pkhd1l1Q80ZA4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.64□□□□□ -0.23
Pkhd1l1Q80ZA4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pkhd1l1Q80ZA4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pkhd1l1Q80ZA4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.64□□□□□ -0.23
Pkhd1l1Q80ZA4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.63□□□□□ -0.23
Pkhd1l1Q80ZA4 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.63□□□□□ -0.23
Pkhd1l1Q80ZA4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC13.63□□□□□ -0.23
Pkhd1l1Q80ZA4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.63□□□□□ -0.23
Pkhd1l1Q80ZA4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkhd1l1Q80ZA4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkhd1l1Q80ZA4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkhd1l1Q80ZA4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkhd1l1Q80ZA4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkhd1l1Q80ZA4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pkhd1l1Q80ZA4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pkhd1l1Q80ZA4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pkhd1l1Q80ZA4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pkhd1l1Q80ZA4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.61□□□□□ -0.23
Pkhd1l1Q80ZA4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.61□□□□□ -0.23
Pkhd1l1Q80ZA4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pkhd1l1Q80ZA4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pkhd1l1Q80ZA4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pkhd1l1Q80ZA4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pkhd1l1Q80ZA4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pkhd1l1Q80ZA4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.61□□□□□ -0.23
Pkhd1l1Q80ZA4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.61□□□□□ -0.23
Pkhd1l1Q80ZA4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pkhd1l1Q80ZA4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pkhd1l1Q80ZA4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.6□□□□□ -0.23
Pkhd1l1Q80ZA4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pkhd1l1Q80ZA4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pkhd1l1Q80ZA4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pkhd1l1Q80ZA4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pkhd1l1Q80ZA4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pkhd1l1Q80ZA4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC13.6□□□□□ -0.23
Pkhd1l1Q80ZA4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pkhd1l1Q80ZA4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Pkhd1l1Q80ZA4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pkhd1l1Q80ZA4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pkhd1l1Q80ZA4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pkhd1l1Q80ZA4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Pkhd1l1Q80ZA4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms