Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ush1gQ80T11 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ush1gQ80T11 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Ush1gQ80T11 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ush1gQ80T11 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ush1gQ80T11 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ush1gQ80T11 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Ush1gQ80T11 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ush1gQ80T11 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ush1gQ80T11 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ush1gQ80T11 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ush1gQ80T11 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ush1gQ80T11 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ush1gQ80T11 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ush1gQ80T11 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ush1gQ80T11 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Ush1gQ80T11 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Ush1gQ80T11 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ush1gQ80T11 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ush1gQ80T11 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ush1gQ80T11 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Ush1gQ80T11 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ush1gQ80T11 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Ush1gQ80T11 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Ush1gQ80T11 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ush1gQ80T11 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.43■■□□□ 1.5
Ush1gQ80T11 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.43■■□□□ 1.5
Ush1gQ80T11 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.43■■□□□ 1.5
Ush1gQ80T11 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Ush1gQ80T11 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ush1gQ80T11 Gm43566-201ENSMUST00000196851 808 ntBASIC24.42■■□□□ 1.5
Ush1gQ80T11 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ush1gQ80T11 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ush1gQ80T11 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ush1gQ80T11 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.41■■□□□ 1.5
Ush1gQ80T11 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.41■■□□□ 1.5
Ush1gQ80T11 Gm15820-201ENSMUST00000201566 728 ntBASIC24.41■■□□□ 1.5
Ush1gQ80T11 Rps24-207ENSMUST00000224568 714 ntBASIC24.41■■□□□ 1.5
Ush1gQ80T11 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ush1gQ80T11 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ush1gQ80T11 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ush1gQ80T11 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.4■■□□□ 1.5
Ush1gQ80T11 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.4■■□□□ 1.5
Ush1gQ80T11 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Ush1gQ80T11 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.39■■□□□ 1.5
Ush1gQ80T11 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ush1gQ80T11 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.39■■□□□ 1.5
Ush1gQ80T11 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.39■■□□□ 1.49
Ush1gQ80T11 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ush1gQ80T11 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ush1gQ80T11 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.38■■□□□ 1.49
Ush1gQ80T11 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Ush1gQ80T11 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
Ush1gQ80T11 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ush1gQ80T11 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ush1gQ80T11 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ush1gQ80T11 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ush1gQ80T11 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Ush1gQ80T11 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Ush1gQ80T11 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.36■■□□□ 1.49
Ush1gQ80T11 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ush1gQ80T11 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Ush1gQ80T11 Gm45444-201ENSMUST00000211394 898 ntBASIC24.35■■□□□ 1.49
Ush1gQ80T11 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ush1gQ80T11 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ush1gQ80T11 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ush1gQ80T11 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ush1gQ80T11 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ush1gQ80T11 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
Ush1gQ80T11 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
Ush1gQ80T11 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ush1gQ80T11 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ush1gQ80T11 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Ush1gQ80T11 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ush1gQ80T11 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ush1gQ80T11 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.32■■□□□ 1.48
Ush1gQ80T11 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Ush1gQ80T11 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.32■■□□□ 1.48
Ush1gQ80T11 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ush1gQ80T11 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ush1gQ80T11 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.31■■□□□ 1.48
Ush1gQ80T11 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ush1gQ80T11 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Ush1gQ80T11 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.31■■□□□ 1.48
Ush1gQ80T11 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ush1gQ80T11 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ush1gQ80T11 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ush1gQ80T11 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ush1gQ80T11 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ush1gQ80T11 Gm13238-201ENSMUST00000117655 780 ntBASIC24.29■■□□□ 1.48
Ush1gQ80T11 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ush1gQ80T11 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ush1gQ80T11 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Ush1gQ80T11 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ush1gQ80T11 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ush1gQ80T11 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ush1gQ80T11 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ush1gQ80T11 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.27■■□□□ 1.48
Ush1gQ80T11 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.27■■□□□ 1.48
Ush1gQ80T11 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms