Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Exosc3Q7TQK4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Exosc3Q7TQK4 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.54■□□□□ 0.88
Exosc3Q7TQK4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Exosc3Q7TQK4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Exosc3Q7TQK4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Exosc3Q7TQK4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
Exosc3Q7TQK4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.53■□□□□ 0.88
Exosc3Q7TQK4 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.53■□□□□ 0.88
Exosc3Q7TQK4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Exosc3Q7TQK4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Exosc3Q7TQK4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Exosc3Q7TQK4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Exosc3Q7TQK4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Exosc3Q7TQK4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Exosc3Q7TQK4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Exosc3Q7TQK4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.51■□□□□ 0.87
Exosc3Q7TQK4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Exosc3Q7TQK4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Exosc3Q7TQK4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Exosc3Q7TQK4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Exosc3Q7TQK4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Exosc3Q7TQK4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.5■□□□□ 0.87
Exosc3Q7TQK4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Exosc3Q7TQK4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Exosc3Q7TQK4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Exosc3Q7TQK4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Exosc3Q7TQK4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Exosc3Q7TQK4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Exosc3Q7TQK4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Exosc3Q7TQK4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Exosc3Q7TQK4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Exosc3Q7TQK4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Exosc3Q7TQK4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Exosc3Q7TQK4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Exosc3Q7TQK4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Exosc3Q7TQK4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Exosc3Q7TQK4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.47■□□□□ 0.87
Exosc3Q7TQK4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.47■□□□□ 0.87
Exosc3Q7TQK4 Gm27502-201ENSMUST00000183495 199 ntBASIC20.47■□□□□ 0.87
Exosc3Q7TQK4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Exosc3Q7TQK4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Exosc3Q7TQK4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Exosc3Q7TQK4 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.46■□□□□ 0.87
Exosc3Q7TQK4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Exosc3Q7TQK4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Exosc3Q7TQK4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Exosc3Q7TQK4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Exosc3Q7TQK4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Exosc3Q7TQK4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Exosc3Q7TQK4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Exosc3Q7TQK4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.45■□□□□ 0.86
Exosc3Q7TQK4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Exosc3Q7TQK4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Exosc3Q7TQK4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Exosc3Q7TQK4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Exosc3Q7TQK4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Exosc3Q7TQK4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Exosc3Q7TQK4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.43■□□□□ 0.86
Exosc3Q7TQK4 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.43■□□□□ 0.86
Exosc3Q7TQK4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Exosc3Q7TQK4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Exosc3Q7TQK4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Exosc3Q7TQK4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Exosc3Q7TQK4 Gm14523-201ENSMUST00000117260 558 ntBASIC20.42■□□□□ 0.86
Exosc3Q7TQK4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.42■□□□□ 0.86
Exosc3Q7TQK4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.42■□□□□ 0.86
Exosc3Q7TQK4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Exosc3Q7TQK4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Exosc3Q7TQK4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Exosc3Q7TQK4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Exosc3Q7TQK4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.41■□□□□ 0.86
Exosc3Q7TQK4 Gm12366-201ENSMUST00000121722 873 ntBASIC20.41■□□□□ 0.86
Exosc3Q7TQK4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.41■□□□□ 0.86
Exosc3Q7TQK4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Exosc3Q7TQK4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Exosc3Q7TQK4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.41■□□□□ 0.86
Exosc3Q7TQK4 Gm5786-201ENSMUST00000085368 882 ntBASIC20.41■□□□□ 0.86
Exosc3Q7TQK4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Exosc3Q7TQK4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Exosc3Q7TQK4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Exosc3Q7TQK4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.4■□□□□ 0.86
Exosc3Q7TQK4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Exosc3Q7TQK4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Exosc3Q7TQK4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Exosc3Q7TQK4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Exosc3Q7TQK4 Gm7332-201ENSMUST00000118351 454 ntBASIC20.39■□□□□ 0.85
Exosc3Q7TQK4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Exosc3Q7TQK4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Exosc3Q7TQK4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Exosc3Q7TQK4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Exosc3Q7TQK4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Exosc3Q7TQK4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.37■□□□□ 0.85
Exosc3Q7TQK4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Exosc3Q7TQK4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Exosc3Q7TQK4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.37■□□□□ 0.85
Exosc3Q7TQK4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Exosc3Q7TQK4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Exosc3Q7TQK4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Exosc3Q7TQK4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms