Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Timd4Q6U7R4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Timd4Q6U7R4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Timd4Q6U7R4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Timd4Q6U7R4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Timd4Q6U7R4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Timd4Q6U7R4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.75■□□□□ 0.91
Timd4Q6U7R4 Gm27502-201ENSMUST00000183495 199 ntBASIC20.75■□□□□ 0.91
Timd4Q6U7R4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Timd4Q6U7R4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Timd4Q6U7R4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.74■□□□□ 0.91
Timd4Q6U7R4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Timd4Q6U7R4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.74■□□□□ 0.91
Timd4Q6U7R4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Timd4Q6U7R4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.74■□□□□ 0.91
Timd4Q6U7R4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Timd4Q6U7R4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.73■□□□□ 0.91
Timd4Q6U7R4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Timd4Q6U7R4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Timd4Q6U7R4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Timd4Q6U7R4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Timd4Q6U7R4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Timd4Q6U7R4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Timd4Q6U7R4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Timd4Q6U7R4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.71■□□□□ 0.91
Timd4Q6U7R4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Timd4Q6U7R4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.71■□□□□ 0.91
Timd4Q6U7R4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Timd4Q6U7R4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Timd4Q6U7R4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Timd4Q6U7R4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Timd4Q6U7R4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Timd4Q6U7R4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Timd4Q6U7R4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Timd4Q6U7R4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Timd4Q6U7R4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Timd4Q6U7R4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.69■□□□□ 0.9
Timd4Q6U7R4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Timd4Q6U7R4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Timd4Q6U7R4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Timd4Q6U7R4 Cap2-205ENSMUST00000225824 1634 ntBASIC20.68■□□□□ 0.9
Timd4Q6U7R4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Timd4Q6U7R4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.68■□□□□ 0.9
Timd4Q6U7R4 Gm12366-201ENSMUST00000121722 873 ntBASIC20.68■□□□□ 0.9
Timd4Q6U7R4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Timd4Q6U7R4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.68■□□□□ 0.9
Timd4Q6U7R4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.68■□□□□ 0.9
Timd4Q6U7R4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.68■□□□□ 0.9
Timd4Q6U7R4 Gm5786-201ENSMUST00000085368 882 ntBASIC20.68■□□□□ 0.9
Timd4Q6U7R4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.68■□□□□ 0.9
Timd4Q6U7R4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Timd4Q6U7R4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Timd4Q6U7R4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Timd4Q6U7R4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.67■□□□□ 0.9
Timd4Q6U7R4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Timd4Q6U7R4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Timd4Q6U7R4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Timd4Q6U7R4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Timd4Q6U7R4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Timd4Q6U7R4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.66■□□□□ 0.9
Timd4Q6U7R4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.66■□□□□ 0.9
Timd4Q6U7R4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Timd4Q6U7R4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
Timd4Q6U7R4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Timd4Q6U7R4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Timd4Q6U7R4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Timd4Q6U7R4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Timd4Q6U7R4 Gm44428-201ENSMUST00000204474 874 ntBASIC20.65■□□□□ 0.9
Timd4Q6U7R4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Timd4Q6U7R4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Timd4Q6U7R4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.65■□□□□ 0.9
Timd4Q6U7R4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Timd4Q6U7R4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Timd4Q6U7R4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Timd4Q6U7R4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Timd4Q6U7R4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Timd4Q6U7R4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Timd4Q6U7R4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.64■□□□□ 0.89
Timd4Q6U7R4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Timd4Q6U7R4 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.63■□□□□ 0.89
Timd4Q6U7R4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Timd4Q6U7R4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Timd4Q6U7R4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Timd4Q6U7R4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Timd4Q6U7R4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Timd4Q6U7R4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Timd4Q6U7R4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.62■□□□□ 0.89
Timd4Q6U7R4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Timd4Q6U7R4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Timd4Q6U7R4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Timd4Q6U7R4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Timd4Q6U7R4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Timd4Q6U7R4 Gm14523-201ENSMUST00000117260 558 ntBASIC20.62■□□□□ 0.89
Timd4Q6U7R4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Timd4Q6U7R4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.62■□□□□ 0.89
Timd4Q6U7R4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Timd4Q6U7R4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Timd4Q6U7R4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Timd4Q6U7R4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Timd4Q6U7R4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms