Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Slc46a1Q6PEM8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Slc46a1Q6PEM8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc46a1Q6PEM8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc46a1Q6PEM8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Slc46a1Q6PEM8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Slc46a1Q6PEM8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc46a1Q6PEM8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc46a1Q6PEM8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a1Q6PEM8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a1Q6PEM8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a1Q6PEM8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Slc46a1Q6PEM8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a1Q6PEM8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a1Q6PEM8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc46a1Q6PEM8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Slc46a1Q6PEM8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc46a1Q6PEM8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.52■□□□□ 0.72
Slc46a1Q6PEM8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc46a1Q6PEM8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Slc46a1Q6PEM8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.5■□□□□ 0.71
Slc46a1Q6PEM8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.5■□□□□ 0.71
Slc46a1Q6PEM8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc46a1Q6PEM8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 Gm5921-201ENSMUST00000075898 882 ntBASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc46a1Q6PEM8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc46a1Q6PEM8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc46a1Q6PEM8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Slc46a1Q6PEM8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc46a1Q6PEM8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a1Q6PEM8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a1Q6PEM8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a1Q6PEM8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc46a1Q6PEM8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a1Q6PEM8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a1Q6PEM8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc46a1Q6PEM8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc46a1Q6PEM8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc46a1Q6PEM8 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.45■□□□□ 0.7
Slc46a1Q6PEM8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Slc46a1Q6PEM8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc46a1Q6PEM8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc46a1Q6PEM8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc46a1Q6PEM8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc46a1Q6PEM8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a1Q6PEM8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a1Q6PEM8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a1Q6PEM8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a1Q6PEM8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.42■□□□□ 0.7
Slc46a1Q6PEM8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a1Q6PEM8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Slc46a1Q6PEM8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a1Q6PEM8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a1Q6PEM8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a1Q6PEM8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a1Q6PEM8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a1Q6PEM8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a1Q6PEM8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a1Q6PEM8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a1Q6PEM8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a1Q6PEM8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.7
Slc46a1Q6PEM8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Slc46a1Q6PEM8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slc46a1Q6PEM8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc46a1Q6PEM8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc46a1Q6PEM8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc46a1Q6PEM8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slc46a1Q6PEM8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms