Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd3Q6P9Z1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd3Q6P9Z1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd3Q6P9Z1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd3Q6P9Z1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd3Q6P9Z1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcd3Q6P9Z1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcd3Q6P9Z1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcd3Q6P9Z1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcd3Q6P9Z1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Smarcd3Q6P9Z1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Smarcd3Q6P9Z1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcd3Q6P9Z1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Smarcd3Q6P9Z1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcd3Q6P9Z1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Smarcd3Q6P9Z1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcd3Q6P9Z1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcd3Q6P9Z1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd3Q6P9Z1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd3Q6P9Z1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd3Q6P9Z1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd3Q6P9Z1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd3Q6P9Z1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.31■□□□□ 0.84
Smarcd3Q6P9Z1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd3Q6P9Z1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Smarcd3Q6P9Z1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcd3Q6P9Z1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.3■□□□□ 0.84
Smarcd3Q6P9Z1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcd3Q6P9Z1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcd3Q6P9Z1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Smarcd3Q6P9Z1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Smarcd3Q6P9Z1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcd3Q6P9Z1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.29■□□□□ 0.84
Smarcd3Q6P9Z1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcd3Q6P9Z1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcd3Q6P9Z1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcd3Q6P9Z1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcd3Q6P9Z1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Smarcd3Q6P9Z1 Gm8503-201ENSMUST00000118131 455 ntBASIC20.28■□□□□ 0.84
Smarcd3Q6P9Z1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcd3Q6P9Z1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcd3Q6P9Z1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcd3Q6P9Z1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.28■□□□□ 0.84
Smarcd3Q6P9Z1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcd3Q6P9Z1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcd3Q6P9Z1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Smarcd3Q6P9Z1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcd3Q6P9Z1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smarcd3Q6P9Z1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd3Q6P9Z1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd3Q6P9Z1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Smarcd3Q6P9Z1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Smarcd3Q6P9Z1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd3Q6P9Z1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.26■□□□□ 0.83
Smarcd3Q6P9Z1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd3Q6P9Z1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.26■□□□□ 0.83
Smarcd3Q6P9Z1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd3Q6P9Z1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
Smarcd3Q6P9Z1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd3Q6P9Z1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd3Q6P9Z1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd3Q6P9Z1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd3Q6P9Z1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcd3Q6P9Z1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.24■□□□□ 0.83
Smarcd3Q6P9Z1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Smarcd3Q6P9Z1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Smarcd3Q6P9Z1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Smarcd3Q6P9Z1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd3Q6P9Z1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd3Q6P9Z1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd3Q6P9Z1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd3Q6P9Z1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd3Q6P9Z1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.22■□□□□ 0.83
Smarcd3Q6P9Z1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd3Q6P9Z1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd3Q6P9Z1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd3Q6P9Z1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd3Q6P9Z1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.21■□□□□ 0.83
Smarcd3Q6P9Z1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd3Q6P9Z1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Smarcd3Q6P9Z1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd3Q6P9Z1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd3Q6P9Z1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Smarcd3Q6P9Z1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd3Q6P9Z1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.2■□□□□ 0.82
Smarcd3Q6P9Z1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd3Q6P9Z1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.2■□□□□ 0.82
Smarcd3Q6P9Z1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd3Q6P9Z1 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.2■□□□□ 0.82
Smarcd3Q6P9Z1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd3Q6P9Z1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd3Q6P9Z1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd3Q6P9Z1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Smarcd3Q6P9Z1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcd3Q6P9Z1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcd3Q6P9Z1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd3Q6P9Z1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd3Q6P9Z1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Smarcd3Q6P9Z1 Gm4799-201ENSMUST00000095396 657 ntBASIC20.17■□□□□ 0.82
Smarcd3Q6P9Z1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms