Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-2Q5R1I4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-2Q5R1I4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6-2Q5R1I4 Gm15820-201ENSMUST00000201566 728 ntBASIC19.75■□□□□ 0.75
Trav6-2Q5R1I4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6-2Q5R1I4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.75■□□□□ 0.75
Trav6-2Q5R1I4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6-2Q5R1I4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.75■□□□□ 0.75
Trav6-2Q5R1I4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav6-2Q5R1I4 Gm13238-201ENSMUST00000117655 780 ntBASIC19.74■□□□□ 0.75
Trav6-2Q5R1I4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trav6-2Q5R1I4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-2Q5R1I4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-2Q5R1I4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-2Q5R1I4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-2Q5R1I4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.73■□□□□ 0.75
Trav6-2Q5R1I4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.73■□□□□ 0.75
Trav6-2Q5R1I4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.72■□□□□ 0.75
Trav6-2Q5R1I4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.72■□□□□ 0.75
Trav6-2Q5R1I4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.72■□□□□ 0.75
Trav6-2Q5R1I4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav6-2Q5R1I4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav6-2Q5R1I4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav6-2Q5R1I4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trav6-2Q5R1I4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-2Q5R1I4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-2Q5R1I4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-2Q5R1I4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-2Q5R1I4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-2Q5R1I4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-2Q5R1I4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.71■□□□□ 0.75
Trav6-2Q5R1I4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6-2Q5R1I4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.7■□□□□ 0.74
Trav6-2Q5R1I4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Trav6-2Q5R1I4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav6-2Q5R1I4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav6-2Q5R1I4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
Trav6-2Q5R1I4 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.69■□□□□ 0.74
Trav6-2Q5R1I4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
Trav6-2Q5R1I4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-2Q5R1I4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-2Q5R1I4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trav6-2Q5R1I4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trav6-2Q5R1I4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-2Q5R1I4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-2Q5R1I4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav6-2Q5R1I4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trav6-2Q5R1I4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-2Q5R1I4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-2Q5R1I4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-2Q5R1I4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trav6-2Q5R1I4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.66■□□□□ 0.74
Trav6-2Q5R1I4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.66■□□□□ 0.74
Trav6-2Q5R1I4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-2Q5R1I4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.66■□□□□ 0.74
Trav6-2Q5R1I4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-2Q5R1I4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6-2Q5R1I4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6-2Q5R1I4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6-2Q5R1I4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6-2Q5R1I4 Rps24-207ENSMUST00000224568 714 ntBASIC19.65■□□□□ 0.74
Trav6-2Q5R1I4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6-2Q5R1I4 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.65■□□□□ 0.74
Trav6-2Q5R1I4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.65■□□□□ 0.74
Trav6-2Q5R1I4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trav6-2Q5R1I4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-2Q5R1I4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trav6-2Q5R1I4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.64■□□□□ 0.73
Trav6-2Q5R1I4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-2Q5R1I4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trav6-2Q5R1I4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trav6-2Q5R1I4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-2Q5R1I4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-2Q5R1I4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trav6-2Q5R1I4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav6-2Q5R1I4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.63■□□□□ 0.73
Trav6-2Q5R1I4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trav6-2Q5R1I4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav6-2Q5R1I4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.63■□□□□ 0.73
Trav6-2Q5R1I4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.63■□□□□ 0.73
Trav6-2Q5R1I4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-2Q5R1I4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-2Q5R1I4 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.62■□□□□ 0.73
Trav6-2Q5R1I4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-2Q5R1I4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-2Q5R1I4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-2Q5R1I4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-2Q5R1I4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-2Q5R1I4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-2Q5R1I4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-2Q5R1I4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-2Q5R1I4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trav6-2Q5R1I4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-2Q5R1I4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-2Q5R1I4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trav6-2Q5R1I4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6-2Q5R1I4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6-2Q5R1I4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6-2Q5R1I4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-2Q5R1I4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms