Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.26
Vps13aQ5H8C4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.89■■□□□ 1.25
Vps13aQ5H8C4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Vps13aQ5H8C4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
Vps13aQ5H8C4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
Vps13aQ5H8C4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.87■■□□□ 1.25
Vps13aQ5H8C4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Vps13aQ5H8C4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Vps13aQ5H8C4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Vps13aQ5H8C4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vps13aQ5H8C4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Vps13aQ5H8C4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.87■■□□□ 1.25
Vps13aQ5H8C4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Vps13aQ5H8C4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Vps13aQ5H8C4 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.86■■□□□ 1.25
Vps13aQ5H8C4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.85■■□□□ 1.25
Vps13aQ5H8C4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Vps13aQ5H8C4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Vps13aQ5H8C4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.84■■□□□ 1.25
Vps13aQ5H8C4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vps13aQ5H8C4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Vps13aQ5H8C4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Vps13aQ5H8C4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Vps13aQ5H8C4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Vps13aQ5H8C4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Vps13aQ5H8C4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.81■■□□□ 1.24
Vps13aQ5H8C4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vps13aQ5H8C4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vps13aQ5H8C4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Vps13aQ5H8C4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Vps13aQ5H8C4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Vps13aQ5H8C4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Vps13aQ5H8C4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vps13aQ5H8C4 Amer2-203ENSMUST00000225247 2662 ntBASIC22.78■■□□□ 1.24
Vps13aQ5H8C4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vps13aQ5H8C4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.78■■□□□ 1.24
Vps13aQ5H8C4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vps13aQ5H8C4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.77■■□□□ 1.24
Vps13aQ5H8C4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Vps13aQ5H8C4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Vps13aQ5H8C4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Vps13aQ5H8C4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Vps13aQ5H8C4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.76■■□□□ 1.23
Vps13aQ5H8C4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Vps13aQ5H8C4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vps13aQ5H8C4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Vps13aQ5H8C4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vps13aQ5H8C4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vps13aQ5H8C4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.76■■□□□ 1.23
Vps13aQ5H8C4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Vps13aQ5H8C4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vps13aQ5H8C4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.75■■□□□ 1.23
Vps13aQ5H8C4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Vps13aQ5H8C4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.74■■□□□ 1.23
Vps13aQ5H8C4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vps13aQ5H8C4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Vps13aQ5H8C4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vps13aQ5H8C4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Vps13aQ5H8C4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.73■■□□□ 1.23
Vps13aQ5H8C4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vps13aQ5H8C4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
Vps13aQ5H8C4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vps13aQ5H8C4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vps13aQ5H8C4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vps13aQ5H8C4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Vps13aQ5H8C4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vps13aQ5H8C4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Vps13aQ5H8C4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vps13aQ5H8C4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vps13aQ5H8C4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vps13aQ5H8C4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vps13aQ5H8C4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vps13aQ5H8C4 Gm9847-201ENSMUST00000052528 599 ntBASIC22.71■■□□□ 1.23
Vps13aQ5H8C4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Vps13aQ5H8C4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.71■■□□□ 1.23
Vps13aQ5H8C4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Vps13aQ5H8C4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Vps13aQ5H8C4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Vps13aQ5H8C4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Vps13aQ5H8C4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Vps13aQ5H8C4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Vps13aQ5H8C4 Gm29257-201ENSMUST00000186115 639 ntBASIC22.68■■□□□ 1.22
Vps13aQ5H8C4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.68■■□□□ 1.22
Vps13aQ5H8C4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Vps13aQ5H8C4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Vps13aQ5H8C4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Vps13aQ5H8C4 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.68■■□□□ 1.22
Vps13aQ5H8C4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Vps13aQ5H8C4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vps13aQ5H8C4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vps13aQ5H8C4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vps13aQ5H8C4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vps13aQ5H8C4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.66■■□□□ 1.22
Vps13aQ5H8C4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vps13aQ5H8C4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vps13aQ5H8C4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.66■■□□□ 1.22
Vps13aQ5H8C4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Vps13aQ5H8C4 Zxda-201ENSMUST00000117281 2621 ntBASIC22.65■■□□□ 1.22
Vps13aQ5H8C4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Vps13aQ5H8C4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms