Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.53■■□□□ 1.84
Rnf20Q5DTM8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Rnf20Q5DTM8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rnf20Q5DTM8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rnf20Q5DTM8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Rnf20Q5DTM8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rnf20Q5DTM8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.52■■□□□ 1.84
Rnf20Q5DTM8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rnf20Q5DTM8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rnf20Q5DTM8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Rnf20Q5DTM8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rnf20Q5DTM8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rnf20Q5DTM8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rnf20Q5DTM8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rnf20Q5DTM8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rnf20Q5DTM8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rnf20Q5DTM8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rnf20Q5DTM8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Rnf20Q5DTM8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Rnf20Q5DTM8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.5■■□□□ 1.83
Rnf20Q5DTM8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.5■■□□□ 1.83
Rnf20Q5DTM8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Rnf20Q5DTM8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Rnf20Q5DTM8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.49■■□□□ 1.83
Rnf20Q5DTM8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.49■■□□□ 1.83
Rnf20Q5DTM8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Rnf20Q5DTM8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Rnf20Q5DTM8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rnf20Q5DTM8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Rnf20Q5DTM8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rnf20Q5DTM8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Rnf20Q5DTM8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rnf20Q5DTM8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rnf20Q5DTM8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Rnf20Q5DTM8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Rnf20Q5DTM8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Rnf20Q5DTM8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Rnf20Q5DTM8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
Rnf20Q5DTM8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rnf20Q5DTM8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rnf20Q5DTM8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.44■■□□□ 1.82
Rnf20Q5DTM8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rnf20Q5DTM8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rnf20Q5DTM8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rnf20Q5DTM8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.43■■□□□ 1.82
Rnf20Q5DTM8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.42■■□□□ 1.82
Rnf20Q5DTM8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Rnf20Q5DTM8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Rnf20Q5DTM8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rnf20Q5DTM8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rnf20Q5DTM8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Rnf20Q5DTM8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rnf20Q5DTM8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rnf20Q5DTM8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Rnf20Q5DTM8 Scarna2-201ENSMUST00000157560 414 ntBASIC26.4■■□□□ 1.82
Rnf20Q5DTM8 Gm9806-201ENSMUST00000051080 552 ntBASIC26.4■■□□□ 1.82
Rnf20Q5DTM8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Rnf20Q5DTM8 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.4■■□□□ 1.82
Rnf20Q5DTM8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Rnf20Q5DTM8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Rnf20Q5DTM8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rnf20Q5DTM8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.39■■□□□ 1.82
Rnf20Q5DTM8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rnf20Q5DTM8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rnf20Q5DTM8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rnf20Q5DTM8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rnf20Q5DTM8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rnf20Q5DTM8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Rnf20Q5DTM8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rnf20Q5DTM8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rnf20Q5DTM8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
Rnf20Q5DTM8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.38■■□□□ 1.81
Rnf20Q5DTM8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rnf20Q5DTM8 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.37■■□□□ 1.81
Rnf20Q5DTM8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.37■■□□□ 1.81
Rnf20Q5DTM8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rnf20Q5DTM8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Rnf20Q5DTM8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.37■■□□□ 1.81
Rnf20Q5DTM8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rnf20Q5DTM8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rnf20Q5DTM8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rnf20Q5DTM8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rnf20Q5DTM8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.36■■□□□ 1.81
Rnf20Q5DTM8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rnf20Q5DTM8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Rnf20Q5DTM8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rnf20Q5DTM8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rnf20Q5DTM8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rnf20Q5DTM8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Rnf20Q5DTM8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rnf20Q5DTM8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rnf20Q5DTM8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf20Q5DTM8 Gm16437-201ENSMUST00000025669 507 ntBASIC26.34■■□□□ 1.81
Rnf20Q5DTM8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf20Q5DTM8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf20Q5DTM8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf20Q5DTM8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Rnf20Q5DTM8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf20Q5DTM8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rnf20Q5DTM8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms