Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Golgb1-201ENSMUST00000023534 498 ntBASIC14.04□□□□□ -0.16
Herc2Q4U2R1 Gm12922-201ENSMUST00000120626 809 ntBASIC14.03□□□□□ -0.16
Herc2Q4U2R1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Herc2Q4U2R1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Herc2Q4U2R1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Herc2Q4U2R1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.03□□□□□ -0.16
Herc2Q4U2R1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Herc2Q4U2R1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Herc2Q4U2R1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Herc2Q4U2R1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.03□□□□□ -0.16
Herc2Q4U2R1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.03□□□□□ -0.16
Herc2Q4U2R1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.02□□□□□ -0.16
Herc2Q4U2R1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Herc2Q4U2R1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Herc2Q4U2R1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Herc2Q4U2R1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Herc2Q4U2R1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Herc2Q4U2R1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Herc2Q4U2R1 Gm44428-201ENSMUST00000204474 874 ntBASIC14.02□□□□□ -0.17
Herc2Q4U2R1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Herc2Q4U2R1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Herc2Q4U2R1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Herc2Q4U2R1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Herc2Q4U2R1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Herc2Q4U2R1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Herc2Q4U2R1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC14□□□□□ -0.17
Herc2Q4U2R1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14□□□□□ -0.17
Herc2Q4U2R1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Herc2Q4U2R1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.99□□□□□ -0.17
Herc2Q4U2R1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Herc2Q4U2R1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Herc2Q4U2R1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Herc2Q4U2R1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.99□□□□□ -0.17
Herc2Q4U2R1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.99□□□□□ -0.17
Herc2Q4U2R1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Herc2Q4U2R1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.99□□□□□ -0.17
Herc2Q4U2R1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Herc2Q4U2R1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Herc2Q4U2R1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Herc2Q4U2R1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.98□□□□□ -0.17
Herc2Q4U2R1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Herc2Q4U2R1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.98□□□□□ -0.17
Herc2Q4U2R1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.98□□□□□ -0.17
Herc2Q4U2R1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.98□□□□□ -0.17
Herc2Q4U2R1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Herc2Q4U2R1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC13.98□□□□□ -0.17
Herc2Q4U2R1 Gm7417-201ENSMUST00000192950 473 ntBASIC13.98□□□□□ -0.17
Herc2Q4U2R1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Herc2Q4U2R1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Herc2Q4U2R1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Herc2Q4U2R1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Herc2Q4U2R1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Herc2Q4U2R1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Herc2Q4U2R1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Herc2Q4U2R1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC13.96□□□□□ -0.17
Herc2Q4U2R1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Herc2Q4U2R1 Gm28731-201ENSMUST00000185564 1569 ntBASIC13.95□□□□□ -0.18
Herc2Q4U2R1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Herc2Q4U2R1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Herc2Q4U2R1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Herc2Q4U2R1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Herc2Q4U2R1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
Herc2Q4U2R1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Herc2Q4U2R1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Herc2Q4U2R1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Herc2Q4U2R1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Herc2Q4U2R1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Herc2Q4U2R1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Herc2Q4U2R1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.94□□□□□ -0.18
Herc2Q4U2R1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Herc2Q4U2R1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.94□□□□□ -0.18
Herc2Q4U2R1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Herc2Q4U2R1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Herc2Q4U2R1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Herc2Q4U2R1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Herc2Q4U2R1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Herc2Q4U2R1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Herc2Q4U2R1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Herc2Q4U2R1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC13.92□□□□□ -0.18
Herc2Q4U2R1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Herc2Q4U2R1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.92□□□□□ -0.18
Herc2Q4U2R1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Herc2Q4U2R1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Herc2Q4U2R1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Herc2Q4U2R1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.92□□□□□ -0.18
Herc2Q4U2R1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Herc2Q4U2R1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Herc2Q4U2R1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Herc2Q4U2R1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Herc2Q4U2R1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Herc2Q4U2R1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Herc2Q4U2R1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Herc2Q4U2R1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.91□□□□□ -0.18
Herc2Q4U2R1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Herc2Q4U2R1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.91□□□□□ -0.18
Herc2Q4U2R1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.9□□□□□ -0.18
Herc2Q4U2R1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Herc2Q4U2R1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Herc2Q4U2R1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.9□□□□□ -0.18
Herc2Q4U2R1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms