Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Lsmem1Q3UQS2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Lsmem1Q3UQS2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Lsmem1Q3UQS2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Lsmem1Q3UQS2 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.77■■□□□ 1.24
Lsmem1Q3UQS2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Lsmem1Q3UQS2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Lsmem1Q3UQS2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Lsmem1Q3UQS2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.77■■□□□ 1.24
Lsmem1Q3UQS2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Lsmem1Q3UQS2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Lsmem1Q3UQS2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Lsmem1Q3UQS2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Lsmem1Q3UQS2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.75■■□□□ 1.23
Lsmem1Q3UQS2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Lsmem1Q3UQS2 Gm27502-201ENSMUST00000183495 199 ntBASIC22.74■■□□□ 1.23
Lsmem1Q3UQS2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Lsmem1Q3UQS2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Lsmem1Q3UQS2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Lsmem1Q3UQS2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Lsmem1Q3UQS2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Lsmem1Q3UQS2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Lsmem1Q3UQS2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Lsmem1Q3UQS2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Lsmem1Q3UQS2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Lsmem1Q3UQS2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Lsmem1Q3UQS2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Lsmem1Q3UQS2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Lsmem1Q3UQS2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Lsmem1Q3UQS2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.7■■□□□ 1.22
Lsmem1Q3UQS2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.7■■□□□ 1.22
Lsmem1Q3UQS2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.7■■□□□ 1.22
Lsmem1Q3UQS2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Lsmem1Q3UQS2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Lsmem1Q3UQS2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Lsmem1Q3UQS2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Lsmem1Q3UQS2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Lsmem1Q3UQS2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
Lsmem1Q3UQS2 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.68■■□□□ 1.22
Lsmem1Q3UQS2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Lsmem1Q3UQS2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Lsmem1Q3UQS2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 Gm14523-201ENSMUST00000117260 558 ntBASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 Gm12366-201ENSMUST00000121722 873 ntBASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 Gm5786-201ENSMUST00000085368 882 ntBASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Lsmem1Q3UQS2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Lsmem1Q3UQS2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.66■■□□□ 1.22
Lsmem1Q3UQS2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lsmem1Q3UQS2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Lsmem1Q3UQS2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Lsmem1Q3UQS2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Lsmem1Q3UQS2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lsmem1Q3UQS2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.64■■□□□ 1.21
Lsmem1Q3UQS2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lsmem1Q3UQS2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lsmem1Q3UQS2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lsmem1Q3UQS2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lsmem1Q3UQS2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lsmem1Q3UQS2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lsmem1Q3UQS2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lsmem1Q3UQS2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lsmem1Q3UQS2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lsmem1Q3UQS2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Lsmem1Q3UQS2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.62■■□□□ 1.21
Lsmem1Q3UQS2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lsmem1Q3UQS2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lsmem1Q3UQS2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lsmem1Q3UQS2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Lsmem1Q3UQS2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lsmem1Q3UQS2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lsmem1Q3UQS2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Lsmem1Q3UQS2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Lsmem1Q3UQS2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.61■■□□□ 1.21
Lsmem1Q3UQS2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Lsmem1Q3UQS2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lsmem1Q3UQS2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lsmem1Q3UQS2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms