Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.53■■□□□ 1.04
Rnf44Q3UHJ8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.53■■□□□ 1.04
Rnf44Q3UHJ8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf44Q3UHJ8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.53■■□□□ 1.04
Rnf44Q3UHJ8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf44Q3UHJ8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf44Q3UHJ8 Gm27502-201ENSMUST00000183495 199 ntBASIC21.52■■□□□ 1.04
Rnf44Q3UHJ8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf44Q3UHJ8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rnf44Q3UHJ8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Rnf44Q3UHJ8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf44Q3UHJ8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Rnf44Q3UHJ8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.51■■□□□ 1.03
Rnf44Q3UHJ8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.51■■□□□ 1.03
Rnf44Q3UHJ8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Rnf44Q3UHJ8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf44Q3UHJ8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf44Q3UHJ8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Rnf44Q3UHJ8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf44Q3UHJ8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rnf44Q3UHJ8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf44Q3UHJ8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf44Q3UHJ8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.49■■□□□ 1.03
Rnf44Q3UHJ8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf44Q3UHJ8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf44Q3UHJ8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf44Q3UHJ8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rnf44Q3UHJ8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf44Q3UHJ8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf44Q3UHJ8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.48■■□□□ 1.03
Rnf44Q3UHJ8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Rnf44Q3UHJ8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf44Q3UHJ8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Rnf44Q3UHJ8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf44Q3UHJ8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf44Q3UHJ8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.47■■□□□ 1.03
Rnf44Q3UHJ8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf44Q3UHJ8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf44Q3UHJ8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.47■■□□□ 1.03
Rnf44Q3UHJ8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf44Q3UHJ8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf44Q3UHJ8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.46■■□□□ 1.03
Rnf44Q3UHJ8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.46■■□□□ 1.03
Rnf44Q3UHJ8 Gm12366-201ENSMUST00000121722 873 ntBASIC21.46■■□□□ 1.03
Rnf44Q3UHJ8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.46■■□□□ 1.03
Rnf44Q3UHJ8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.46■■□□□ 1.03
Rnf44Q3UHJ8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.46■■□□□ 1.03
Rnf44Q3UHJ8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf44Q3UHJ8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.46■■□□□ 1.03
Rnf44Q3UHJ8 Gm5786-201ENSMUST00000085368 882 ntBASIC21.46■■□□□ 1.03
Rnf44Q3UHJ8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf44Q3UHJ8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf44Q3UHJ8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf44Q3UHJ8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rnf44Q3UHJ8 Gm14523-201ENSMUST00000117260 558 ntBASIC21.45■■□□□ 1.02
Rnf44Q3UHJ8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf44Q3UHJ8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf44Q3UHJ8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf44Q3UHJ8 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.45■■□□□ 1.02
Rnf44Q3UHJ8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.44■■□□□ 1.02
Rnf44Q3UHJ8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Rnf44Q3UHJ8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf44Q3UHJ8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.44■■□□□ 1.02
Rnf44Q3UHJ8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf44Q3UHJ8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf44Q3UHJ8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf44Q3UHJ8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf44Q3UHJ8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf44Q3UHJ8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf44Q3UHJ8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Rnf44Q3UHJ8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf44Q3UHJ8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Rnf44Q3UHJ8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf44Q3UHJ8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rnf44Q3UHJ8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rnf44Q3UHJ8 Gm7332-201ENSMUST00000118351 454 ntBASIC21.41■■□□□ 1.02
Rnf44Q3UHJ8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf44Q3UHJ8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf44Q3UHJ8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf44Q3UHJ8 Cap2-205ENSMUST00000225824 1634 ntBASIC21.4■■□□□ 1.02
Rnf44Q3UHJ8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf44Q3UHJ8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rnf44Q3UHJ8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Rnf44Q3UHJ8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rnf44Q3UHJ8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rnf44Q3UHJ8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Rnf44Q3UHJ8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.39■■□□□ 1.01
Rnf44Q3UHJ8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.39■■□□□ 1.01
Rnf44Q3UHJ8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf44Q3UHJ8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf44Q3UHJ8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf44Q3UHJ8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf44Q3UHJ8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf44Q3UHJ8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf44Q3UHJ8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf44Q3UHJ8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.38■■□□□ 1.01
Rnf44Q3UHJ8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf44Q3UHJ8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf44Q3UHJ8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf44Q3UHJ8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms