Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp25Q3U435 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp25Q3U435 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp25Q3U435 Gm7332-201ENSMUST00000118351 454 ntBASIC21.07■□□□□ 0.96
Mmp25Q3U435 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp25Q3U435 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.06■□□□□ 0.96
Mmp25Q3U435 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.06■□□□□ 0.96
Mmp25Q3U435 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp25Q3U435 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Mmp25Q3U435 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp25Q3U435 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp25Q3U435 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp25Q3U435 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp25Q3U435 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.05■□□□□ 0.96
Mmp25Q3U435 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp25Q3U435 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp25Q3U435 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.05■□□□□ 0.96
Mmp25Q3U435 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp25Q3U435 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp25Q3U435 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp25Q3U435 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.04■□□□□ 0.96
Mmp25Q3U435 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp25Q3U435 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp25Q3U435 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp25Q3U435 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.03■□□□□ 0.96
Mmp25Q3U435 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Mmp25Q3U435 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Mmp25Q3U435 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp25Q3U435 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp25Q3U435 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.02■□□□□ 0.96
Mmp25Q3U435 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp25Q3U435 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp25Q3U435 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp25Q3U435 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Mmp25Q3U435 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.02■□□□□ 0.95
Mmp25Q3U435 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.01■□□□□ 0.95
Mmp25Q3U435 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.01■□□□□ 0.95
Mmp25Q3U435 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp25Q3U435 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21■□□□□ 0.95
Mmp25Q3U435 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp25Q3U435 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp25Q3U435 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp25Q3U435 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp25Q3U435 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp25Q3U435 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp25Q3U435 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Mmp25Q3U435 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp25Q3U435 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp25Q3U435 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp25Q3U435 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp25Q3U435 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Mmp25Q3U435 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Mmp25Q3U435 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp25Q3U435 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp25Q3U435 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp25Q3U435 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.95■□□□□ 0.94
Mmp25Q3U435 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp25Q3U435 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp25Q3U435 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp25Q3U435 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp25Q3U435 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Mmp25Q3U435 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp25Q3U435 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp25Q3U435 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Mmp25Q3U435 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Mmp25Q3U435 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Mmp25Q3U435 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp25Q3U435 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp25Q3U435 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Mmp25Q3U435 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp25Q3U435 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp25Q3U435 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp25Q3U435 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp25Q3U435 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp25Q3U435 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp25Q3U435 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp25Q3U435 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp25Q3U435 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp25Q3U435 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp25Q3U435 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp25Q3U435 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mmp25Q3U435 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mmp25Q3U435 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Mmp25Q3U435 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Mmp25Q3U435 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp25Q3U435 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp25Q3U435 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Mmp25Q3U435 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp25Q3U435 Gm10420-201ENSMUST00000121713 882 ntBASIC20.88■□□□□ 0.93
Mmp25Q3U435 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp25Q3U435 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp25Q3U435 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp25Q3U435 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp25Q3U435 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Mmp25Q3U435 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.87■□□□□ 0.93
Mmp25Q3U435 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp25Q3U435 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.87■□□□□ 0.93
Mmp25Q3U435 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.87■□□□□ 0.93
Mmp25Q3U435 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.86■□□□□ 0.93
Mmp25Q3U435 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms