Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Q3KNL4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Q3KNL4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Q3KNL4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
Q3KNL4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Q3KNL4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
Q3KNL4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Q3KNL4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Q3KNL4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Q3KNL4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Q3KNL4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Q3KNL4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Q3KNL4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Q3KNL4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Q3KNL4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Q3KNL4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.78■■□□□ 1.08
Q3KNL4 Gm4799-201ENSMUST00000095396 657 ntBASIC21.78■■□□□ 1.08
Q3KNL4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Q3KNL4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Q3KNL4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Q3KNL4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Q3KNL4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Q3KNL4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Q3KNL4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Q3KNL4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Q3KNL4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.76■■□□□ 1.07
Q3KNL4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.76■■□□□ 1.07
Q3KNL4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Q3KNL4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Q3KNL4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Q3KNL4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Q3KNL4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Q3KNL4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.75■■□□□ 1.07
Q3KNL4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Q3KNL4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Q3KNL4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Q3KNL4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Q3KNL4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Q3KNL4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Q3KNL4 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.73■■□□□ 1.07
Q3KNL4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Q3KNL4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Q3KNL4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Q3KNL4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Q3KNL4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Q3KNL4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.72■■□□□ 1.07
Q3KNL4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Q3KNL4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Q3KNL4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
Q3KNL4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Q3KNL4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Q3KNL4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Q3KNL4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Q3KNL4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Q3KNL4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Q3KNL4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Q3KNL4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Q3KNL4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.69■■□□□ 1.06
Q3KNL4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Q3KNL4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Q3KNL4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Q3KNL4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Q3KNL4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Q3KNL4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Q3KNL4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Q3KNL4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Q3KNL4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.67■■□□□ 1.06
Q3KNL4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Q3KNL4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Q3KNL4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Q3KNL4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.66■■□□□ 1.06
Q3KNL4 Gm7432-201ENSMUST00000210343 879 ntBASIC21.66■■□□□ 1.06
Q3KNL4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.66■■□□□ 1.06
Q3KNL4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Q3KNL4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Q3KNL4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Q3KNL4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Q3KNL4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Q3KNL4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Q3KNL4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Q3KNL4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Q3KNL4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Q3KNL4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Q3KNL4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Q3KNL4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.64■■□□□ 1.05
Q3KNL4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Q3KNL4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Q3KNL4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Q3KNL4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Q3KNL4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.63■■□□□ 1.05
Q3KNL4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Q3KNL4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Q3KNL4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Q3KNL4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Q3KNL4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Q3KNL4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Q3KNL4 Mir3960-201ENSMUST00000198213 73 ntBASIC21.62■■□□□ 1.05
Q3KNL4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Q3KNL4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Q3KNL4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms