Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smn1P97801 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smn1P97801 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smn1P97801 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Smn1P97801 Gm37136-201ENSMUST00000194368 194 ntBASIC19.06■□□□□ 0.64
Smn1P97801 Nkain2-201ENSMUST00000092602 558 ntBASIC19.06■□□□□ 0.64
Smn1P97801 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smn1P97801 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Smn1P97801 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smn1P97801 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smn1P97801 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smn1P97801 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smn1P97801 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smn1P97801 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Smn1P97801 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smn1P97801 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smn1P97801 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Smn1P97801 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smn1P97801 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smn1P97801 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smn1P97801 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.03■□□□□ 0.64
Smn1P97801 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smn1P97801 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Smn1P97801 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smn1P97801 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smn1P97801 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smn1P97801 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Smn1P97801 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Smn1P97801 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.02■□□□□ 0.63
Smn1P97801 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smn1P97801 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smn1P97801 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smn1P97801 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smn1P97801 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.01■□□□□ 0.63
Smn1P97801 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smn1P97801 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smn1P97801 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smn1P97801 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smn1P97801 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Smn1P97801 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Smn1P97801 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smn1P97801 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Smn1P97801 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.99■□□□□ 0.63
Smn1P97801 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smn1P97801 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smn1P97801 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smn1P97801 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smn1P97801 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smn1P97801 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smn1P97801 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Smn1P97801 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.98■□□□□ 0.63
Smn1P97801 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smn1P97801 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Smn1P97801 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.97■□□□□ 0.63
Smn1P97801 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smn1P97801 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.97■□□□□ 0.63
Smn1P97801 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smn1P97801 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smn1P97801 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.96■□□□□ 0.63
Smn1P97801 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smn1P97801 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smn1P97801 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smn1P97801 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smn1P97801 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smn1P97801 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smn1P97801 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smn1P97801 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.95■□□□□ 0.62
Smn1P97801 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.95■□□□□ 0.62
Smn1P97801 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smn1P97801 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.95■□□□□ 0.62
Smn1P97801 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smn1P97801 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smn1P97801 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smn1P97801 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.94■□□□□ 0.62
Smn1P97801 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smn1P97801 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smn1P97801 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smn1P97801 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smn1P97801 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smn1P97801 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Smn1P97801 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smn1P97801 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smn1P97801 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smn1P97801 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smn1P97801 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smn1P97801 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smn1P97801 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Smn1P97801 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.92■□□□□ 0.62
Smn1P97801 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.92■□□□□ 0.62
Smn1P97801 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.92■□□□□ 0.62
Smn1P97801 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.92■□□□□ 0.62
Smn1P97801 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smn1P97801 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smn1P97801 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smn1P97801 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smn1P97801 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smn1P97801 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smn1P97801 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.91■□□□□ 0.62
Smn1P97801 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Smn1P97801 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms