Protein–RNA interactions for Protein: P62823

Rab3c, Ras-related protein Rab-3C, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3cP62823 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rab3cP62823 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rab3cP62823 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Rab3cP62823 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab3cP62823 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rab3cP62823 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.91■□□□□ 0.62
Rab3cP62823 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rab3cP62823 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3cP62823 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3cP62823 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3cP62823 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.9■□□□□ 0.62
Rab3cP62823 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3cP62823 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rab3cP62823 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab3cP62823 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.89■□□□□ 0.61
Rab3cP62823 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab3cP62823 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.89■□□□□ 0.61
Rab3cP62823 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rab3cP62823 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3cP62823 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.88■□□□□ 0.61
Rab3cP62823 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3cP62823 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3cP62823 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3cP62823 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3cP62823 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3cP62823 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3cP62823 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rab3cP62823 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3cP62823 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rab3cP62823 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3cP62823 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3cP62823 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab3cP62823 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab3cP62823 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Rab3cP62823 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Rab3cP62823 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.85■□□□□ 0.61
Rab3cP62823 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab3cP62823 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab3cP62823 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab3cP62823 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab3cP62823 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rab3cP62823 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab3cP62823 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab3cP62823 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab3cP62823 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.84■□□□□ 0.61
Rab3cP62823 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab3cP62823 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab3cP62823 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rab3cP62823 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab3cP62823 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab3cP62823 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.83■□□□□ 0.6
Rab3cP62823 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab3cP62823 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab3cP62823 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.82■□□□□ 0.6
Rab3cP62823 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rab3cP62823 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab3cP62823 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab3cP62823 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab3cP62823 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rab3cP62823 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Rab3cP62823 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab3cP62823 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab3cP62823 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.81■□□□□ 0.6
Rab3cP62823 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab3cP62823 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.8■□□□□ 0.6
Rab3cP62823 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rab3cP62823 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.8■□□□□ 0.6
Rab3cP62823 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab3cP62823 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab3cP62823 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.8■□□□□ 0.6
Rab3cP62823 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab3cP62823 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab3cP62823 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab3cP62823 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rab3cP62823 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab3cP62823 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.78■□□□□ 0.6
Rab3cP62823 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab3cP62823 Gm37136-201ENSMUST00000194368 194 ntBASIC18.78■□□□□ 0.6
Rab3cP62823 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rab3cP62823 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.78■□□□□ 0.6
Rab3cP62823 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab3cP62823 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab3cP62823 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rab3cP62823 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab3cP62823 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.77■□□□□ 0.6
Rab3cP62823 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rab3cP62823 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab3cP62823 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab3cP62823 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rab3cP62823 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rab3cP62823 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab3cP62823 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab3cP62823 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab3cP62823 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rab3cP62823 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab3cP62823 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab3cP62823 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rab3cP62823 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab3cP62823 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.75■□□□□ 0.59
Rab3cP62823 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms