Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.53■□□□□ 0.72
Lsm6P62313 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Lsm6P62313 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm6P62313 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm6P62313 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm6P62313 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm6P62313 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.52■□□□□ 0.72
Lsm6P62313 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm6P62313 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.52■□□□□ 0.72
Lsm6P62313 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm6P62313 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.52■□□□□ 0.72
Lsm6P62313 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm6P62313 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Lsm6P62313 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.51■□□□□ 0.71
Lsm6P62313 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm6P62313 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm6P62313 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm6P62313 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.51■□□□□ 0.71
Lsm6P62313 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm6P62313 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm6P62313 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.5■□□□□ 0.71
Lsm6P62313 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm6P62313 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Lsm6P62313 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
Lsm6P62313 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm6P62313 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm6P62313 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm6P62313 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm6P62313 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm6P62313 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm6P62313 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.49■□□□□ 0.71
Lsm6P62313 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm6P62313 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Lsm6P62313 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm6P62313 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.49■□□□□ 0.71
Lsm6P62313 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm6P62313 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm6P62313 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm6P62313 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm6P62313 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lsm6P62313 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.48■□□□□ 0.71
Lsm6P62313 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.47■□□□□ 0.71
Lsm6P62313 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Lsm6P62313 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm6P62313 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm6P62313 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm6P62313 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm6P62313 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm6P62313 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm6P62313 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm6P62313 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm6P62313 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm6P62313 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm6P62313 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm6P62313 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.45■□□□□ 0.7
Lsm6P62313 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.44■□□□□ 0.7
Lsm6P62313 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm6P62313 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lsm6P62313 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm6P62313 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lsm6P62313 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm6P62313 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm6P62313 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm6P62313 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Lsm6P62313 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lsm6P62313 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm6P62313 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm6P62313 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm6P62313 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm6P62313 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.43■□□□□ 0.7
Lsm6P62313 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.43■□□□□ 0.7
Lsm6P62313 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm6P62313 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm6P62313 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lsm6P62313 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Lsm6P62313 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.41■□□□□ 0.7
Lsm6P62313 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm6P62313 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm6P62313 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm6P62313 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Lsm6P62313 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm6P62313 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.4■□□□□ 0.7
Lsm6P62313 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.4■□□□□ 0.7
Lsm6P62313 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm6P62313 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm6P62313 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lsm6P62313 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm6P62313 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm6P62313 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm6P62313 Gm9806-201ENSMUST00000051080 552 ntBASIC19.39■□□□□ 0.69
Lsm6P62313 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm6P62313 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lsm6P62313 Scarna2-201ENSMUST00000157560 414 ntBASIC19.38■□□□□ 0.69
Lsm6P62313 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Lsm6P62313 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Lsm6P62313 Gm44428-201ENSMUST00000204474 874 ntBASIC19.38■□□□□ 0.69
Lsm6P62313 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm6P62313 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm6P62313 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm6P62313 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms