Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.07■□□□□ 0.96
Nup43P59235 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup43P59235 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup43P59235 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup43P59235 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup43P59235 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.06■□□□□ 0.96
Nup43P59235 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nup43P59235 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nup43P59235 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup43P59235 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup43P59235 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Nup43P59235 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup43P59235 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.05■□□□□ 0.96
Nup43P59235 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup43P59235 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup43P59235 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Nup43P59235 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Nup43P59235 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup43P59235 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nup43P59235 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup43P59235 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup43P59235 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nup43P59235 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.04■□□□□ 0.96
Nup43P59235 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.04■□□□□ 0.96
Nup43P59235 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Nup43P59235 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup43P59235 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.03■□□□□ 0.96
Nup43P59235 Gm27502-201ENSMUST00000183495 199 ntBASIC21.03■□□□□ 0.96
Nup43P59235 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nup43P59235 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nup43P59235 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup43P59235 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup43P59235 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup43P59235 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup43P59235 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup43P59235 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Nup43P59235 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup43P59235 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.01■□□□□ 0.95
Nup43P59235 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup43P59235 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup43P59235 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nup43P59235 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Nup43P59235 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nup43P59235 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nup43P59235 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Nup43P59235 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.99■□□□□ 0.95
Nup43P59235 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.99■□□□□ 0.95
Nup43P59235 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nup43P59235 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup43P59235 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nup43P59235 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup43P59235 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.98■□□□□ 0.95
Nup43P59235 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup43P59235 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.98■□□□□ 0.95
Nup43P59235 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup43P59235 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Nup43P59235 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nup43P59235 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Nup43P59235 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nup43P59235 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup43P59235 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Nup43P59235 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nup43P59235 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup43P59235 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.96■□□□□ 0.95
Nup43P59235 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nup43P59235 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.96■□□□□ 0.95
Nup43P59235 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.96■□□□□ 0.95
Nup43P59235 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Nup43P59235 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup43P59235 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Nup43P59235 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup43P59235 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup43P59235 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nup43P59235 Gm14523-201ENSMUST00000117260 558 ntBASIC20.94■□□□□ 0.94
Nup43P59235 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.94■□□□□ 0.94
Nup43P59235 Gm12366-201ENSMUST00000121722 873 ntBASIC20.94■□□□□ 0.94
Nup43P59235 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.94■□□□□ 0.94
Nup43P59235 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.94■□□□□ 0.94
Nup43P59235 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.94■□□□□ 0.94
Nup43P59235 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.94■□□□□ 0.94
Nup43P59235 Gm5786-201ENSMUST00000085368 882 ntBASIC20.94■□□□□ 0.94
Nup43P59235 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup43P59235 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup43P59235 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nup43P59235 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup43P59235 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nup43P59235 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup43P59235 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup43P59235 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup43P59235 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.92■□□□□ 0.94
Nup43P59235 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nup43P59235 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Nup43P59235 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nup43P59235 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Nup43P59235 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nup43P59235 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup43P59235 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nup43P59235 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Nup43P59235 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup43P59235 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms