Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.67■□□□□ 0.58
Foxa3P35584 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa3P35584 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa3P35584 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa3P35584 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Foxa3P35584 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxa3P35584 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxa3P35584 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Foxa3P35584 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa3P35584 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.64■□□□□ 0.57
Foxa3P35584 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa3P35584 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa3P35584 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Foxa3P35584 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa3P35584 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa3P35584 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.64■□□□□ 0.57
Foxa3P35584 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Foxa3P35584 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Foxa3P35584 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Foxa3P35584 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa3P35584 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa3P35584 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa3P35584 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Foxa3P35584 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa3P35584 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa3P35584 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa3P35584 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa3P35584 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa3P35584 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa3P35584 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.6■□□□□ 0.57
Foxa3P35584 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Foxa3P35584 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Foxa3P35584 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Foxa3P35584 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Foxa3P35584 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Foxa3P35584 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.6■□□□□ 0.57
Foxa3P35584 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Foxa3P35584 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.6■□□□□ 0.57
Foxa3P35584 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Foxa3P35584 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Foxa3P35584 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Foxa3P35584 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxa3P35584 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxa3P35584 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Foxa3P35584 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxa3P35584 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxa3P35584 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.58■□□□□ 0.57
Foxa3P35584 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Foxa3P35584 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa3P35584 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa3P35584 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa3P35584 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa3P35584 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa3P35584 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa3P35584 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Foxa3P35584 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxa3P35584 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Foxa3P35584 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Foxa3P35584 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Foxa3P35584 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxa3P35584 Notumos-201ENSMUST00000151998 2659 ntBASIC18.57■□□□□ 0.56
Foxa3P35584 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxa3P35584 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Foxa3P35584 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxa3P35584 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Foxa3P35584 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Foxa3P35584 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Foxa3P35584 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxa3P35584 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Foxa3P35584 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.55■□□□□ 0.56
Foxa3P35584 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Foxa3P35584 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxa3P35584 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.55■□□□□ 0.56
Foxa3P35584 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxa3P35584 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Foxa3P35584 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Foxa3P35584 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.54■□□□□ 0.56
Foxa3P35584 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Foxa3P35584 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxa3P35584 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxa3P35584 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Foxa3P35584 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Foxa3P35584 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Foxa3P35584 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Foxa3P35584 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Foxa3P35584 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.52■□□□□ 0.55
Foxa3P35584 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Foxa3P35584 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Foxa3P35584 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Foxa3P35584 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.5■□□□□ 0.55
Foxa3P35584 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Foxa3P35584 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxa3P35584 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.5■□□□□ 0.55
Foxa3P35584 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxa3P35584 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxa3P35584 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxa3P35584 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa3P35584 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Foxa3P35584 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxa3P35584 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms