Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rom1P32958 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.69■□□□□ 0.42
Rom1P32958 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rom1P32958 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rom1P32958 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.68■□□□□ 0.42
Rom1P32958 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rom1P32958 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rom1P32958 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rom1P32958 Gm24970-201ENSMUST00000175582 82 ntBASIC17.68■□□□□ 0.42
Rom1P32958 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rom1P32958 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.68■□□□□ 0.42
Rom1P32958 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.68■□□□□ 0.42
Rom1P32958 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rom1P32958 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rom1P32958 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.67■□□□□ 0.42
Rom1P32958 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rom1P32958 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rom1P32958 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.67■□□□□ 0.42
Rom1P32958 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rom1P32958 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rom1P32958 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.67■□□□□ 0.42
Rom1P32958 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.67■□□□□ 0.42
Rom1P32958 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rom1P32958 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.67■□□□□ 0.42
Rom1P32958 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rom1P32958 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Rom1P32958 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.66■□□□□ 0.42
Rom1P32958 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rom1P32958 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rom1P32958 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rom1P32958 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rom1P32958 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rom1P32958 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.65■□□□□ 0.42
Rom1P32958 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rom1P32958 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rom1P32958 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rom1P32958 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rom1P32958 Zfp131-205ENSMUST00000223812 663 ntBASIC17.64■□□□□ 0.41
Rom1P32958 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rom1P32958 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rom1P32958 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.63■□□□□ 0.41
Rom1P32958 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rom1P32958 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rom1P32958 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rom1P32958 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rom1P32958 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rom1P32958 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rom1P32958 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Rom1P32958 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rom1P32958 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rom1P32958 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rom1P32958 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rom1P32958 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rom1P32958 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rom1P32958 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rom1P32958 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.6■□□□□ 0.41
Rom1P32958 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rom1P32958 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rom1P32958 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rom1P32958 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rom1P32958 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rom1P32958 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rom1P32958 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rom1P32958 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.58■□□□□ 0.4
Rom1P32958 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rom1P32958 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rom1P32958 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rom1P32958 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rom1P32958 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rom1P32958 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rom1P32958 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rom1P32958 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.57■□□□□ 0.4
Rom1P32958 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rom1P32958 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rom1P32958 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rom1P32958 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rom1P32958 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rom1P32958 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rom1P32958 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.56■□□□□ 0.4
Rom1P32958 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.56■□□□□ 0.4
Rom1P32958 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.56■□□□□ 0.4
Rom1P32958 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rom1P32958 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rom1P32958 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rom1P32958 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rom1P32958 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rom1P32958 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rom1P32958 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rom1P32958 Gm9397-201ENSMUST00000200125 605 ntBASIC17.55■□□□□ 0.4
Rom1P32958 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rom1P32958 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms