Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a1P31648 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a1P31648 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Slc6a1P31648 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a1P31648 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.12■□□□□ 0.65
Slc6a1P31648 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a1P31648 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a1P31648 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a1P31648 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a1P31648 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a1P31648 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a1P31648 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a1P31648 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Slc6a1P31648 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a1P31648 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a1P31648 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a1P31648 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a1P31648 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a1P31648 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a1P31648 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Slc6a1P31648 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Slc6a1P31648 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a1P31648 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a1P31648 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a1P31648 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a1P31648 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slc6a1P31648 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Slc6a1P31648 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc6a1P31648 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
Slc6a1P31648 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc6a1P31648 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc6a1P31648 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a1P31648 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a1P31648 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.07■□□□□ 0.64
Slc6a1P31648 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a1P31648 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a1P31648 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a1P31648 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a1P31648 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a1P31648 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.07■□□□□ 0.64
Slc6a1P31648 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Slc6a1P31648 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a1P31648 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.06■□□□□ 0.64
Slc6a1P31648 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.06■□□□□ 0.64
Slc6a1P31648 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a1P31648 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a1P31648 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Slc6a1P31648 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.05■□□□□ 0.64
Slc6a1P31648 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.05■□□□□ 0.64
Slc6a1P31648 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a1P31648 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a1P31648 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a1P31648 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.04■□□□□ 0.64
Slc6a1P31648 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a1P31648 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a1P31648 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Slc6a1P31648 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a1P31648 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a1P31648 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a1P31648 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a1P31648 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a1P31648 Gm8503-201ENSMUST00000118131 455 ntBASIC19.03■□□□□ 0.64
Slc6a1P31648 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Slc6a1P31648 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a1P31648 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a1P31648 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a1P31648 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a1P31648 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a1P31648 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a1P31648 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.01■□□□□ 0.63
Slc6a1P31648 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a1P31648 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Slc6a1P31648 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a1P31648 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc6a1P31648 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19■□□□□ 0.63
Slc6a1P31648 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Slc6a1P31648 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Slc6a1P31648 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a1P31648 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a1P31648 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a1P31648 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Slc6a1P31648 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a1P31648 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a1P31648 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a1P31648 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a1P31648 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Slc6a1P31648 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Slc6a1P31648 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a1P31648 Gm6821-201ENSMUST00000107540 542 ntBASIC18.97■□□□□ 0.63
Slc6a1P31648 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a1P31648 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Slc6a1P31648 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a1P31648 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Slc6a1P31648 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a1P31648 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a1P31648 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.96■□□□□ 0.63
Slc6a1P31648 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a1P31648 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a1P31648 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a1P31648 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms