Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm26115-201ENSMUST00000175605 87 ntBASIC20.7■□□□□ 0.9
Nedd8P29595 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nedd8P29595 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nedd8P29595 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nedd8P29595 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.7■□□□□ 0.9
Nedd8P29595 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd8P29595 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd8P29595 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd8P29595 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd8P29595 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.69■□□□□ 0.9
Nedd8P29595 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd8P29595 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nedd8P29595 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd8P29595 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd8P29595 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd8P29595 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd8P29595 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nedd8P29595 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Nedd8P29595 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nedd8P29595 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd8P29595 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nedd8P29595 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd8P29595 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nedd8P29595 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.67■□□□□ 0.9
Nedd8P29595 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd8P29595 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.66■□□□□ 0.9
Nedd8P29595 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd8P29595 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd8P29595 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nedd8P29595 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd8P29595 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd8P29595 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
Nedd8P29595 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd8P29595 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd8P29595 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd8P29595 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nedd8P29595 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nedd8P29595 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd8P29595 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd8P29595 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nedd8P29595 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nedd8P29595 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd8P29595 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nedd8P29595 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Nedd8P29595 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd8P29595 Notumos-201ENSMUST00000151998 2659 ntBASIC20.62■□□□□ 0.89
Nedd8P29595 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd8P29595 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd8P29595 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nedd8P29595 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nedd8P29595 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd8P29595 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.6■□□□□ 0.89
Nedd8P29595 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nedd8P29595 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd8P29595 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd8P29595 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd8P29595 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd8P29595 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Nedd8P29595 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nedd8P29595 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nedd8P29595 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Nedd8P29595 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nedd8P29595 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Nedd8P29595 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nedd8P29595 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nedd8P29595 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nedd8P29595 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nedd8P29595 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nedd8P29595 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nedd8P29595 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nedd8P29595 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nedd8P29595 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nedd8P29595 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nedd8P29595 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nedd8P29595 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nedd8P29595 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nedd8P29595 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nedd8P29595 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nedd8P29595 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Nedd8P29595 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Nedd8P29595 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nedd8P29595 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nedd8P29595 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nedd8P29595 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nedd8P29595 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Nedd8P29595 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nedd8P29595 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nedd8P29595 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nedd8P29595 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nedd8P29595 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nedd8P29595 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nedd8P29595 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.55■□□□□ 0.88
Nedd8P29595 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nedd8P29595 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nedd8P29595 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Nedd8P29595 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nedd8P29595 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nedd8P29595 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nedd8P29595 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nedd8P29595 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms