Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd40P27512 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.25■□□□□ 0.83
Cd40P27512 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.25■□□□□ 0.83
Cd40P27512 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Cd40P27512 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd40P27512 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd40P27512 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd40P27512 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cd40P27512 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd40P27512 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cd40P27512 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd40P27512 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd40P27512 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.23■□□□□ 0.83
Cd40P27512 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.23■□□□□ 0.83
Cd40P27512 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd40P27512 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd40P27512 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd40P27512 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd40P27512 Mir6538-201ENSMUST00000183713 110 ntBASIC20.22■□□□□ 0.83
Cd40P27512 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd40P27512 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd40P27512 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.21■□□□□ 0.83
Cd40P27512 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd40P27512 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cd40P27512 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cd40P27512 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cd40P27512 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cd40P27512 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.19■□□□□ 0.82
Cd40P27512 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cd40P27512 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cd40P27512 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd40P27512 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cd40P27512 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cd40P27512 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.18■□□□□ 0.82
Cd40P27512 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cd40P27512 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cd40P27512 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd40P27512 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd40P27512 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd40P27512 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd40P27512 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.15■□□□□ 0.82
Cd40P27512 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd40P27512 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd40P27512 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cd40P27512 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd40P27512 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd40P27512 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cd40P27512 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd40P27512 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd40P27512 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Cd40P27512 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd40P27512 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd40P27512 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cd40P27512 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cd40P27512 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cd40P27512 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.13■□□□□ 0.81
Cd40P27512 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cd40P27512 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd40P27512 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd40P27512 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd40P27512 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd40P27512 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd40P27512 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Cd40P27512 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cd40P27512 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.11■□□□□ 0.81
Cd40P27512 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.11■□□□□ 0.81
Cd40P27512 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cd40P27512 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cd40P27512 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cd40P27512 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cd40P27512 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cd40P27512 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.1■□□□□ 0.81
Cd40P27512 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cd40P27512 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cd40P27512 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cd40P27512 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Cd40P27512 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.09■□□□□ 0.81
Cd40P27512 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cd40P27512 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd40P27512 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cd40P27512 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd40P27512 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd40P27512 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.08■□□□□ 0.81
Cd40P27512 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd40P27512 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cd40P27512 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.08■□□□□ 0.81
Cd40P27512 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.08■□□□□ 0.81
Cd40P27512 Gm27502-201ENSMUST00000183495 199 ntBASIC20.08■□□□□ 0.81
Cd40P27512 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd40P27512 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.08■□□□□ 0.81
Cd40P27512 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd40P27512 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd40P27512 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cd40P27512 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd40P27512 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Cd40P27512 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cd40P27512 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd40P27512 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.07■□□□□ 0.8
Cd40P27512 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd40P27512 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms