Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd40P27512 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.25■□□□□ 0.83
Cd40P27512 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.25■□□□□ 0.83
Cd40P27512 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Cd40P27512 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd40P27512 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd40P27512 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd40P27512 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cd40P27512 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd40P27512 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cd40P27512 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd40P27512 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd40P27512 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.23■□□□□ 0.83
Cd40P27512 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.23■□□□□ 0.83
Cd40P27512 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd40P27512 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd40P27512 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd40P27512 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd40P27512 Mir6538-201ENSMUST00000183713 110 ntBASIC20.22■□□□□ 0.83
Cd40P27512 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd40P27512 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd40P27512 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.21■□□□□ 0.83
Cd40P27512 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd40P27512 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cd40P27512 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cd40P27512 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cd40P27512 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cd40P27512 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.19■□□□□ 0.82
Cd40P27512 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cd40P27512 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cd40P27512 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd40P27512 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cd40P27512 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cd40P27512 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.18■□□□□ 0.82
Cd40P27512 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cd40P27512 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cd40P27512 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd40P27512 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd40P27512 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd40P27512 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd40P27512 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.15■□□□□ 0.82
Cd40P27512 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd40P27512 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd40P27512 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cd40P27512 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd40P27512 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd40P27512 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cd40P27512 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd40P27512 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd40P27512 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Cd40P27512 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd40P27512 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd40P27512 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cd40P27512 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cd40P27512 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cd40P27512 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.13■□□□□ 0.81
Cd40P27512 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cd40P27512 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd40P27512 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd40P27512 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd40P27512 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd40P27512 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd40P27512 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Cd40P27512 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cd40P27512 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.11■□□□□ 0.81
Cd40P27512 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.11■□□□□ 0.81
Cd40P27512 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cd40P27512 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cd40P27512 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cd40P27512 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cd40P27512 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cd40P27512 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.1■□□□□ 0.81
Cd40P27512 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cd40P27512 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cd40P27512 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cd40P27512 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Cd40P27512 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.09■□□□□ 0.81
Cd40P27512 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cd40P27512 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd40P27512 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cd40P27512 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd40P27512 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd40P27512 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.08■□□□□ 0.81
Cd40P27512 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd40P27512 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cd40P27512 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.08■□□□□ 0.81
Cd40P27512 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.08■□□□□ 0.81
Cd40P27512 Gm27502-201ENSMUST00000183495 199 ntBASIC20.08■□□□□ 0.81
Cd40P27512 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd40P27512 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.08■□□□□ 0.81
Cd40P27512 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd40P27512 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd40P27512 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cd40P27512 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd40P27512 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Cd40P27512 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cd40P27512 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd40P27512 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.07■□□□□ 0.8
Cd40P27512 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd40P27512 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms