Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf1bP25119 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Tnfrsf1bP25119 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf1bP25119 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf1bP25119 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf1bP25119 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf1bP25119 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf1bP25119 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf1bP25119 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf1bP25119 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf1bP25119 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf1bP25119 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.62■□□□□ 0.89
Tnfrsf1bP25119 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf1bP25119 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tnfrsf1bP25119 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.62■□□□□ 0.89
Tnfrsf1bP25119 Gm12366-201ENSMUST00000121722 873 ntBASIC20.62■□□□□ 0.89
Tnfrsf1bP25119 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.62■□□□□ 0.89
Tnfrsf1bP25119 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf1bP25119 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf1bP25119 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.62■□□□□ 0.89
Tnfrsf1bP25119 Gm5786-201ENSMUST00000085368 882 ntBASIC20.62■□□□□ 0.89
Tnfrsf1bP25119 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tnfrsf1bP25119 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf1bP25119 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf1bP25119 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf1bP25119 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf1bP25119 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf1bP25119 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf1bP25119 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.6■□□□□ 0.89
Tnfrsf1bP25119 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.6■□□□□ 0.89
Tnfrsf1bP25119 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf1bP25119 Cap2-205ENSMUST00000225824 1634 ntBASIC20.6■□□□□ 0.89
Tnfrsf1bP25119 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf1bP25119 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf1bP25119 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.59■□□□□ 0.89
Tnfrsf1bP25119 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf1bP25119 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf1bP25119 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.59■□□□□ 0.89
Tnfrsf1bP25119 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf1bP25119 Gm14523-201ENSMUST00000117260 558 ntBASIC20.58■□□□□ 0.89
Tnfrsf1bP25119 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.58■□□□□ 0.89
Tnfrsf1bP25119 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.58■□□□□ 0.89
Tnfrsf1bP25119 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.58■□□□□ 0.89
Tnfrsf1bP25119 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Tnfrsf1bP25119 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf1bP25119 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfrsf1bP25119 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.58■□□□□ 0.88
Tnfrsf1bP25119 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfrsf1bP25119 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tnfrsf1bP25119 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.57■□□□□ 0.88
Tnfrsf1bP25119 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf1bP25119 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf1bP25119 Gm7332-201ENSMUST00000118351 454 ntBASIC20.57■□□□□ 0.88
Tnfrsf1bP25119 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.57■□□□□ 0.88
Tnfrsf1bP25119 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf1bP25119 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf1bP25119 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf1bP25119 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf1bP25119 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tnfrsf1bP25119 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf1bP25119 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Tnfrsf1bP25119 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf1bP25119 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tnfrsf1bP25119 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf1bP25119 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Tnfrsf1bP25119 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf1bP25119 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tnfrsf1bP25119 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf1bP25119 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf1bP25119 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.54■□□□□ 0.88
Tnfrsf1bP25119 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf1bP25119 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf1bP25119 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tnfrsf1bP25119 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf1bP25119 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf1bP25119 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.53■□□□□ 0.88
Tnfrsf1bP25119 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf1bP25119 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.53■□□□□ 0.88
Tnfrsf1bP25119 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Tnfrsf1bP25119 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf1bP25119 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf1bP25119 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf1bP25119 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.52■□□□□ 0.88
Tnfrsf1bP25119 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.52■□□□□ 0.88
Tnfrsf1bP25119 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.52■□□□□ 0.88
Tnfrsf1bP25119 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf1bP25119 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Tnfrsf1bP25119 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tnfrsf1bP25119 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf1bP25119 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.51■□□□□ 0.87
Tnfrsf1bP25119 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf1bP25119 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf1bP25119 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf1bP25119 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf1bP25119 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf1bP25119 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tnfrsf1bP25119 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf1bP25119 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf1bP25119 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf1bP25119 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms