Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf9P20334 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfrsf9P20334 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf9P20334 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf9P20334 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf9P20334 Gm15820-201ENSMUST00000201566 728 ntBASIC17.9■□□□□ 0.46
Tnfrsf9P20334 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf9P20334 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfrsf9P20334 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Tnfrsf9P20334 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf9P20334 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Tnfrsf9P20334 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Tnfrsf9P20334 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Tnfrsf9P20334 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Tnfrsf9P20334 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.88■□□□□ 0.45
Tnfrsf9P20334 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf9P20334 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Tnfrsf9P20334 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf9P20334 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.87■□□□□ 0.45
Tnfrsf9P20334 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.87■□□□□ 0.45
Tnfrsf9P20334 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tnfrsf9P20334 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf9P20334 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf9P20334 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Tnfrsf9P20334 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf9P20334 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.86■□□□□ 0.45
Tnfrsf9P20334 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf9P20334 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Tnfrsf9P20334 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Tnfrsf9P20334 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf9P20334 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf9P20334 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.85■□□□□ 0.45
Tnfrsf9P20334 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Tnfrsf9P20334 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.85■□□□□ 0.45
Tnfrsf9P20334 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf9P20334 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf9P20334 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf9P20334 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf9P20334 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf9P20334 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf9P20334 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf9P20334 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf9P20334 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf9P20334 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf9P20334 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf9P20334 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.84■□□□□ 0.45
Tnfrsf9P20334 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Tnfrsf9P20334 Rps24-207ENSMUST00000224568 714 ntBASIC17.84■□□□□ 0.45
Tnfrsf9P20334 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf9P20334 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Tnfrsf9P20334 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf9P20334 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfrsf9P20334 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf9P20334 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf9P20334 Terc-201ENSMUST00000082862 423 ntBASIC17.83■□□□□ 0.44
Tnfrsf9P20334 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf9P20334 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.82■□□□□ 0.44
Tnfrsf9P20334 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Tnfrsf9P20334 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf9P20334 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf9P20334 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf9P20334 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Tnfrsf9P20334 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf9P20334 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf9P20334 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tnfrsf9P20334 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf9P20334 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf9P20334 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf9P20334 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf9P20334 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
Tnfrsf9P20334 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf9P20334 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tnfrsf9P20334 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf9P20334 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf9P20334 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tnfrsf9P20334 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf9P20334 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf9P20334 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf9P20334 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf9P20334 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf9P20334 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf9P20334 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf9P20334 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf9P20334 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf9P20334 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tnfrsf9P20334 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf9P20334 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf9P20334 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf9P20334 Gm13238-201ENSMUST00000117655 780 ntBASIC17.76■□□□□ 0.43
Tnfrsf9P20334 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Tnfrsf9P20334 Gm14117-201ENSMUST00000122417 843 ntBASIC17.76■□□□□ 0.43
Tnfrsf9P20334 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.76■□□□□ 0.43
Tnfrsf9P20334 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf9P20334 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf9P20334 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf9P20334 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf9P20334 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf9P20334 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf9P20334 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tnfrsf9P20334 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms